Athalia rosae (coleseed sawfly): 105692160
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Entry
105692160 CDS
T09776
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105692160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroa03009
]
105692160
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105692160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_SCAP
Lactonase
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
105692160
NCBI-ProteinID:
XP_012266605
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Position
6:complement(14476962..14479897)
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AA seq
686 aa
AA seq
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MSTCRIHNFKLYNIEPKAIICLSYERKSARLVLCRNDNSIEIWNVQEAPFLERTIVAHPE
SSVESVLWVNERLFSTGLVGMVIEYDLGSLVPKYEVPVTGGAAWCMDVNKSKTYIAVGTE
DGYINTFSISDDYLIYDKIFDKQEGRILCIRWDITEQMIFTGSIDTIRVWNAISGHAVHR
MTTSRKVTSKETIVWCLAVTDENIVVSGDSRGILSFWDPAMGTLIESHESHEADILAVSM
SDDMNTVYCSGVDPTICSYSKITVKFNCKWVKGIERRLHEHDVRALVEANGKLYSAGVDG
HLVMSSYPPKTVVKYPPFLQFPCVLVSRRSKCILLRYRNYLELWKLGSVNKKTQTNCRPG
TIHQLHEEPVSLLQLKTKASDSIISYAVTSDSRIIAYSTNSCIKIFGFQIKDNEPILTRY
EVALPLQKAHKMLFSPDDSRLVLVDGNKTEDDTMRIIFMKNENGNLSYEGVISVEKELVD
NVNLICYSPNGKYLVCADYRGNIVVYSIDKNLEKTKMIVLPKYHCPPTAIAVQEKTLNVV
IVYCDHKIVEYDIVKRRYTPFSLNLEERLPKQWLSRAIPVSHVTFDPRNENIIIMHDNTV
ICVIDKRKTLPTAETKIPKLESGDSLENSYPEMHYSSQEGFHIIKKYKNLLLLDWLVDDE
MVAVEVNPVALVEKLPPSLKRKRFGM
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatgtagaattcacaatttcaagctgtacaatattgagccaaaggccattatc
tgcttgtcctatgagcggaagagcgctcgccttgtcctttgcagaaatgacaactcaatc
gagatatggaatgtacaagaggcaccgtttctcgaaaggacgatagttgcacacccagag
agttctgtggagtctgtactatgggtgaacgagcgattattttctactgggcttgtagga
atggtgatagagtatgacttgggaagtttggtgccaaaatatgaagttcctgtgactggc
ggagcggcatggtgtatggatgtgaataaatcaaagacctatatagcagttggtacagaa
gatggttacataaatacctttagcatctcagacgattatctgatatatgacaaaattttt
gataaacaagaagggcgaatattatgcatacgatgggacatcactgagcagatgatattc
actggatcaattgacacaattcgtgtttggaatgctatttcaggacacgccgttcacaga
atgactacatctagaaaagtgacaagcaaagaaacaatagtctggtgtttagcagtgacc
gatgagaacattgttgtatctggagattcaagagggattctctctttttgggaccctgca
atggggaccttgattgaatcccatgaaagccatgaagctgatattcttgcagttagtatg
agtgatgacatgaatactgtatattgttctggagttgaccccacaatttgcagctactca
aaaatcacagtcaagtttaactgtaagtgggtgaaaggtatagaaaggagattgcacgag
cacgatgttagagcactggtagaagctaatggcaagttatactctgcaggagtcgatgga
catttggtaatgtcatcttatccgccaaaaaccgttgtcaaatatccaccttttctgcag
ttcccttgtgtactagtgagcaggagatccaaatgcatacttttaagatatcgcaattac
ctcgaactgtggaaactggggtcagtcaataagaaaacgcagacgaactgtcgtccagga
acaatacaccagctccatgaagagccagtcagtttgctgcaattgaaaactaaagctagt
gacagtatcatttcttatgctgttactagcgattccagaattatagcttactcgacaaat
tcttgtatcaagatatttggttttcaaatcaaagacaatgaacctatcctcaccagatat
gaggtagctctgcctctgcagaaagcacataaaatgttattcagtccagatgattcacgt
cttgtgcttgtggatggtaacaaaacggaagacgatacaatgaggattatatttatgaag
aatgagaatggaaatttgagttatgaaggagtcatatcagttgaaaaagaactcgttgat
aatgtcaacttgatctgctactccccaaatggcaaatatctggtatgcgctgactacaga
ggaaatattgttgtatatagcattgacaagaatctggagaaaactaaaatgatagtacta
ccgaaatatcattgtcctccaactgctattgctgtacaagaaaaaactttgaatgtcgtt
atcgtatattgtgatcataagatcgtcgaatatgatatagtgaaaaggagatacacccca
ttctcattgaacttggaagaacgcttaccaaagcagtggctatcacgcgccattcctgtc
agtcacgtaacgtttgacccaagaaatgaaaatattatcataatgcatgacaacactgtt
atttgtgtcattgataagagaaagacattgcccacggcggaaaccaaaataccaaagttg
gaaagtggggactctttggaaaacagttacccagaaatgcattattcatcccaagaggga
ttccacattattaaaaagtacaagaatttgctactcttggactggctggttgatgatgaa
atggtagcagtagaggtaaacccagttgcactggtggaaaaactaccaccatcgctcaaa
cggaagcgatttggaatgtaa
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