Athalia rosae (coleseed sawfly): 105692544
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Entry
105692544 CDS
T09776
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03082
ATP-dependent chromatin remodeling
aroa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105692544
03083 Polycomb repressive complex
105692544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aroa03036
]
105692544
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105692544
Histone modification proteins
HAT complexes
HATB complex
105692544
HDAC complexes
Sin3A-HDAC complex
105692544
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105692544
PRC2.2
105692544
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105692544
Heterochromatin formation proteins
Other heterochromatin formation proteins
105692544
Chromatin remodeling factors
NuRD complex
105692544
NuRF complex
105692544
NuRF complex (fruit fly)
105692544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
105692544
NCBI-ProteinID:
XP_012267251
LinkDB
All DBs
Position
2:complement(29507582..29510330)
Genome browser
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEGGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaagacggagaaacttttgacgatgcagtcgaggaacgtgtcatcaacgaa
gagtacaagatatggaagaagaacacaccatttttgtatgacctagtgatgacccatgca
ttggaatggccatcgctcacagctcaatggttacctgacgtgaccagacctgaaggcaaa
gactattcagtgcatcgtctcattctcggtacccatacctcggatgaacagaaccatctt
ttaattgccagtgtacagctgcctaacgaagatgcacagtttgatgcttcgcattatgac
aatgaaaaaggagaatttggaggctttggttctgttagtggcaagattgaaattgaaata
aaaatcaaccatgaaggagaagttaacagagcgcgatatatgcctcaaaatccttgcgtc
attgctactaagacaccatccagcgatgtattagtttttgattataccaaacatcccagt
aaacctgatccaaatggagaatgccatcctgacctcaggttacgaggtcaccaaaaagaa
ggttacggtttatcttggaaccccaatctgaatggttacttattgagcgcatcggatgac
cacactatatgtttgtgggatattaacgctacacctaaagaacacagagtaattgatgcc
aaaacaatttttactggtcacacagctgtagtcgaagatgtggcctggcacttgctccat
gagtctctttttggatctgttgcagacgaccaaaaacttatgatttgggatacaaggtgt
aataatacaagcaaaccaagtcataccgttgatgctcacacagcggaagtaaattgccta
agtttcaatccctattccgaatttatcctagcaactggaagtgctgacaaaactgtagct
ttatgggatttgagaaatttgaagttgaagcttcactcgttcgagtctcacaaggacgaa
attttccaagtacaatggtctccgcataatgaaacaattttggcaagcagcggtactgat
cgacgtctgcatgtctgggatctcagtaaaattggcgaggaacagtctactgaggacgca
gaggatggtcctccagagttactgttcattcatggcggacacacggctaaaataagtgat
ttttcatggaaccctaatgagccgtgggtgatctgttcagtttctgaagacaatataatg
caagtttggcagatggcggaaaatatctacaatgacgaagagcctgatacgccagcaagt
gaacttgaaggcggagcatcataa
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