Athalia rosae (coleseed sawfly): 105693174
Help
Entry
105693174 CDS
T09776
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105693174
09122 Translation
03013 Nucleocytoplasmic transport
105693174
03015 mRNA surveillance pathway
105693174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105693174
03041 Spliceosome [BR:
aroa03041
]
105693174
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105693174
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105693174
Spliceosome [BR:
aroa03041
]
Complex C
Other components
EJC/TREX
105693174
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105693174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105693174
NCBI-ProteinID:
XP_012268358
LinkDB
All DBs
Position
2:28888090..28893798
Genome browser
AA seq
424 aa
AA seq
DB search
MADNEDLLDYEDDEQTEQVVDGSGDVSAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENVVYVLVMCHTR
ELAFQISKEYERFSKYMPTVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFVLDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDEGDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgaagatcttttggattacgaagatgatgaacagaccgaacaagtagtc
gatgggagtggtgatgtgtcagccaaaaaggaggtcaagggaacttacgtctcaatacat
agcagtgggttccgtgatttcttgctgaagccagaaattctacgtgccattgttgattgc
ggttttgaacatccatctgaagtacaacacgagtgcatcccacaggcggtgctcggcatg
gatatactttgccaagctaagtctggtatgggaaagactgctgtatttgtgttggcaacc
ttgcaacaattggagttgactgaaaatgtagtctacgttttggttatgtgtcacactcga
gaacttgctttccaaattagcaaagagtatgaaaggttcagcaaatacatgccaaccgtc
aaggtcggtgtgttctttggtggtctgccaatacaaaaggatgaggaagtactaaaaaat
acttgccctcacatcgtggtaggaactccaggacgtatccttgcactcgtccgtaacaag
aaactcaatctgaagcaccttaaacattttgttctggacgaatgcgacaagatgcttgaa
ttactggatatgcgacgtgacgtacaggaaatatttaggagtactccgcacgggaagcaa
gtgatgatgttcagcgctaccctgtccaaggatatacgcccagtctgcaagaagttcatg
caagatccgatggaggtatatgtggacgatgaagctaaacttacgttacatggcctacaa
cagcattacgtcaaactcaaagagaatgagaagaataaaaaacttttcgaactcttggat
gtccttgaatttaatcaggtggtgatattcgtcaaatccgtacagaggtgtatggctctt
gcacaactattgactgaacagaacttcccagcaattggtatccaccggggaatgacacag
gaagaacgtctctccagataccaacaattcaaggatttccaaaagcgtattttggttgcc
acaaatctgtttggtcgtggaatggatattgaaagagtgaacattgtttttaactacgac
atgccagaggactccgatacttaccttcacagagtagcacgtgccggtcgatttggtaca
aagggccttgccataacgctggtcagtgacgaaggagatgcaaagattcttaacgatgta
caagaaagattcgatgtcaacattactgaactacctgatgagattgatctagcctcgtac
atcgaaggacgataa
DBGET
integrated database retrieval system
