KEGG   Athalia rosae (coleseed sawfly): 105693254
Entry
105693254         CDS       T09776                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105693254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aroa03400]
    105693254
Enzymes [BR:aroa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105693254
DNA repair and recombination proteins [BR:aroa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105693254
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase
Other DBs
NCBI-GeneID: 105693254
NCBI-ProteinID: XP_025602268
LinkDB
Position
8:4506382..4543423
AA seq 1047 aa
MSDDDRGADNEKPFAIERAKTGRAKCKKCKCPIDQGLVRIAKLMTNPFGDGKMKAWHHLS
CMFDVFAKQRASTKRIEDPEDDVSGWDAMDDEGKEALAAKLEDFENSAPFKKVKKNSPPK
KVAVPAKAAGGPSKVGKPTAATAKVGGGARPGPSTSADFSANGESSREILPKKTTTKDDS
FREFRRLCAAVSNASAYTSKTSIVREKFAKGSDGDGFKSDVILWCKMLLPGITKRIYNLQ
SKQLIKLFSRLFNKDEDDMLEHLEQGDVAETIQIFFEKSSLVQPSKTSDLTIQEVDEFLE
KLSRLTKEDEQTQHLKSILVRCTANDLKMIIRLVKHDLRITAGPKHILDAIHEDAYEAFQ
ASRDLESVVARFVKRSGNTENNITTDHPDGEDRKKPTVSGSKIGISLMTPVLPMLAEACK
SVAMAMKKCPKGMLSEIKYDGERVQVHKRGEEFRYFSRSLKPVMPHKVNHFKDYIPKAFP
GGDDLILDTEVLMIDTNTGKPLPFGSLGVHKKAEFKDANVCLFVFDCLYYNGEPLMEKSM
QKRRQILKDKMTVIPNRIMLSEVEEVQDPKDLANMIAKVIKLGLEGLVLKDVTGKYEPGK
RHWLKVKKDYLLEGAMADTADLVVLGAWYGTGKKGGMKSVFLMGCYDEDKDRWVTVTKVH
TGHDDATLARLQGELEMDKIAKDVNLKPRWLHANKPMVPDFVAKDPKKQPVWEITGAEFT
NQGVHTADGISIRFPRVTRIRDDKDWRSATSLKELRVLFGRSSDSVDVDLLLGNAGSSPP
TKQRTLEAMLRPARSENSDDSSVGNKADESEDSPARSDRKPSLKPSGGRDEIDAKKNGFA
RGAATGNAGRRSDVDEEDRPVEGAGRREATDENREDRRRRSESKRKIENDPGDDDPRTLP
STSTSTTLETVGRIDTKRRKLTTGSPETGDERRAKNKTEEPFDNVRVALAEDIDKDDEKT
LSVILTRLGAKMLNENTEHLATHVIHSSSEVPWTIVRVPGKIPPTARHVTKEWVEACYSD
LGVPPDPKPFAVTLTASHCTCPCPHQS
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgtcggacgacgaccggggggcggacaacgagaaaccgttcgccatagagcgggcgaag
acgggtcgtgcgaagtgcaagaaatgcaaatgtccgatcgaccaggggctcgtgaggata
gccaagctgatgacaaaccctttcggcgacggtaaaatgaaagcgtggcatcatctgtct
tgcatgttcgacgtattcgccaagcaaagggcgtccaccaagcgaatagaggatcccgag
gacgacgtgtccggatgggacgcgatggacgacgaggggaaagaagcgctcgccgccaag
ctggaagattttgaaaattccgcgccgttcaaaaaggtcaagaaaaattcacccccgaaa
aaagtcgctgttccggccaaagcggcgggggggccgtccaaagtcggaaaaccgaccgct
gcaaccgccaaagtcggaggaggtgcacgtccgggaccttcgacgagcgcggatttttcc
gccaacggtgaatcgtcgcgagaaattctaccgaagaaaacaacgaccaaagacgattcc
ttcagagaatttcgacgcttgtgcgcggccgtttccaacgccagcgcttacacgagcaaa
acgtcgatagtgagggaaaaatttgcgaagggatccgatggggacggattcaagagcgac
gtgatactctggtgcaagatgctcctgcccggaataactaagagaatttacaacctgcag
agcaagcagttgataaaattgttcagccggttgttcaacaaggacgaggacgacatgttg
gaacacctcgaacagggcgacgttgcggaaacgattcaaatattttttgaaaaaagttcg
ctagtccaaccgagcaagaccagcgacctcacgatccaggaggtcgacgaatttctcgag
aaactttccaggctaaccaaggaagacgagcagacgcagcacttgaaatccatactagtc
agatgcacagccaacgatctcaagatgataataagactggtgaaacacgatctccgaatt
acggcgggaccgaaacacattctggacgcgatccacgaggacgcttacgaggccttccaa
gcgtccagggatctcgaatcggttgtcgcgagattcgtcaaacgatccggaaatacggag
aataatatcactaccgaccatccggatggcgaagatcgaaaaaaaccgacggtatccggt
agcaaaataggaatctcgttaatgacgcccgttctcccgatgttggcggaggcttgcaaa
tcggtggctatggcgatgaaaaaatgtccgaagggtatgctgtcggagataaagtacgac
ggtgagcgtgtccaggtccacaaacgtggtgaagagttccggtacttcagtcgttcactg
aaacccgtgatgccgcacaaggtaaatcatttcaaggattatatacccaaggcgtttccg
ggtggggatgatttgatactggacaccgaggtcctgatgatcgacacgaataccggaaaa
cctttgccgttcggatcgttgggagttcacaagaaagctgaattcaaagacgcgaacgtc
tgcctgttcgtcttcgactgtctctattacaacggcgaaccgttgatggaaaaatcgatg
caaaaacgacgacagatcctcaaggacaaaatgacggtgataccgaatcggataatgtta
tcggaagtggaggaggttcaggatccgaaggacttggccaacatgatagcgaaggtcata
aaactcggactggaaggtctggttctgaaggacgttacgggcaaatacgagccgggaaaa
agacattggttaaaggtaaagaaggactatctactggagggtgcgatggcggatactgca
gatctggttgtactcggcgcgtggtacggaacgggaaaaaagggtggcatgaagtccgtt
tttttgatgggctgttacgacgaggataaggatcgttgggtgacggtgacgaaggtgcac
accggccacgacgacgcgacgctcgcccgacttcagggcgaattggagatggataagatc
gcaaaggacgttaatctgaagccccgatggcttcacgctaacaaaccgatggttccggac
ttcgtcgccaaggacccgaagaaacaaccagtttgggagataacaggggcagaattcacg
aatcagggtgtccacacggccgacggtataagcatccgatttccccgcgtcactcgcatc
cgggacgacaaggactggaggagcgcaacgtccttgaaagaactgcgggtattgttcggg
aggagttcggattcggtggacgttgatttgctacttggaaatgccggatcgagccctccg
accaaacagcgaactttggaggcgatgttgaggccggcgaggtccgaaaattccgacgat
tcgtcggtcgggaacaaagccgacgaatcggaagattccccggcccgaagcgatcgaaaa
ccgtcattgaaaccgagcggtggccgcgacgagatagacgcgaaaaaaaatggcttcgcc
aggggcgcagctaccggaaacgcgggacgacgttccgacgtcgacgaggaggatcgtccg
gtcgagggggccgggaggagggaggcgaccgatgaaaaccgcgaggatcgtcgtcggcgg
agcgaatcgaagcgaaaaatcgaaaacgacccaggcgacgacgacccccgtacgctgccg
tcgacgtcgacgtcgacgacgttggaaaccgtggggcgaatcgacaccaagcgaagaaaa
ctaacgaccggatccccggaaaccggcgacgaacggcgcgcgaaaaataagaccgaggaa
cccttcgataacgttcgggtggctttggcggaggacatcgacaaggacgacgagaaaacg
ctctccgttatcctcaccagactcggagccaaaatgttgaacgaaaatacggaacatctg
gcgacacacgttatacattccagttcggaagtaccttggacaatagtaagagtgcccggc
aaaattcctcccacggcacgtcacgtgaccaaggaatgggtggaagcttgctactcggat
ctgggggtgccgccggatccgaaaccgttcgccgttactctgaccgcgtcgcattgcacc
tgcccctgtccccaccagagttga

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