Athalia rosae (coleseed sawfly): 105693444
Help
Entry
105693444 CDS
T09776
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X5
KO
K13201
nucleolysin TIA-1/TIAR
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105693444
03041 Spliceosome [BR:
aroa03041
]
105693444
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105693444
Spliceosome [BR:
aroa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105693444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
DUF4523
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
105693444
NCBI-ProteinID:
XP_012268803
LinkDB
All DBs
Position
1:complement(1276980..1637058)
Genome browser
AA seq
418 aa
AA seq
DB search
MASVPGKNKLKMGSAGRYYGAYLLYDVANSCLASLRAKAPLQTMQGAVGGPPQLSLAPGS
PVHIQNPQHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVK
KAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANSKPLTFDEVYNQSSPTNCTVYC
GGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFVRFSTKESATHAIVAVHNTDINGQT
VKCSWGKESGDPNNAQQTGQTLTSATYPYYAAAAAAAAAAAGVAGVAGVGSVGGVGGAGQ
LGYWYPPQSYQTTATQMQAAGGFLPGMQGYTYGQFAGYQQAQYMGMGMGVHAAGTAAGWG
QGLPGGPQLPPHHATTVSAPPGVQAAAPPPPPPAQMMAYPMQQFQLADEDWLAPSLLV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtaccgggaaaaaacaaactgaaaatgggaagcgccggacgttactacggg
gcttacctactctatgacgtagccaattcctgcctggcatccctccgtgccaaggcgccg
ctccagacgatgcagggagcagtcggcggtccaccgcaattatccctggcaccgggatca
cctgtgcacatccagaacccccaacactatcacatattcgtcggtgacctgagtcccgag
atcgaaacgcagacgctgagggaagccttcgcccctttcggggagatctcagactgcaga
gtggtgagggatccgcaaacgctaaagtcgaaaggatatggattcgtctccttcgttaaa
aaagcggaagcggaaagcgccatcggcgcgatgaacggtcagtggctcggcagtcgcagc
attcgcacaaactgggcgacccgcaaaccaccggcgcccaagtctgaagcaaactctaag
ccgctgactttcgacgaagtttataatcagagcagcccgacaaactgcaccgtatactgc
ggaggtcttaccaatggtctcacagaggaattaatgcagaagacattctcgccgttcggc
tccatccaggaaatccgggtcttcaaggacaagggatacgcgttcgtcaggttttcaacg
aaggaatcggcgacgcacgccatagtggcggtccacaacacggacataaacgggcagacg
gtgaaatgcagctggggaaaggagagcggagacccgaataacgcgcagcaaacgggacag
acgctgacctctgcaacgtatccctactatgcggcggcagcggcagcggctgcggcagcg
gcgggcgtcgcgggtgtcgcgggcgttggtagcgtagggggtgtcggaggtgcgggtcaa
ctcgggtattggtacccaccgcaatcctatcaaacaacggccactcagatgcaggcagcc
gggggttttcttccaggaatgcagggctacacctacgggcaattcgccggttaccaacag
gcgcagtacatggggatgggaatgggagtccacgccgcaggtacggccgcgggatggggt
cagggtcttcccggtggacctcagctacccccgcatcacgcaaccacagtctcggcaccc
ccgggagtccaagctgcggctccacctcctccaccacccgcgcagatgatggcctacccc
atgcaacagttccagctagcggatgaggattggctggcgcctagtcttctagtgtga
DBGET
integrated database retrieval system
