Athalia rosae (coleseed sawfly): 105693496
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Entry
105693496 CDS
T09776
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105693496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105693496
03036 Chromosome and associated proteins [BR:
aroa03036
]
105693496
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105693496
Coactivators
SAGA/TFTC/STAGA complex
105693496
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105693496
STAGA complex
105693496
TFTC complex
105693496
SAGA complex
105693496
SLIK complex
105693496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_like
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
RMC1_N
WD40_RFWD3
Beta-prop_DCAF12
Cytochrom_D1
Mala_s_1-like
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
105693496
NCBI-ProteinID:
XP_012268889
LinkDB
All DBs
Position
1:complement(1904897..1908560)
Genome browser
AA seq
588 aa
AA seq
DB search
MKMKRSKLDIINATVESYLKRRHYHQESNVFRKSDRAGSQTSQEMTLSETVQCGTSRDNS
IVFSAITNDVGVADQAYHKLKMWVQTISSEKLRAELRGLLYPIFCHLYLEMLHSGNRQAA
AQFLRMYQNDFVSDTERDFLEELSSVFSIQDIELRPFVNAFRTRKYKVDMSDNAHLCLRK
FLAKQGHVILMQVINTHVTIIKKIEVNPDEDVGRDRGPRSESVINGHVEQPSGTGVDREM
RELQEAIRLIRNNVHQPLRVYTINNANESASCGVITPSMDKLAAGFSTSEIRMWGIGDTV
LMRPRLKVSPSTLPSNYASTSESFSPEDHLDEAGAIVMRGHTDVVHDLRFIPEADVLLSV
SSDKEMRAWRLSDYSCAAVYNGHTYPIWCMDTSVFNLYVATGSHDRTAKLWSLDRTFPLR
IFAGHFLDVNCVRFHPNARYLATGSADKTVRLWSKDDGSLVRVYVGAQSTIYSLAFSPDG
KYLAAAGDDKSVSIWDLATNTQLMELKGHQDTVMNLDWSADGQYIASASIDGAVRLWSTQ
QHINTSNGDNANTQSGPDKTHTYQTSCSTILSLQYYHRNNSLVCIGTS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaacgatcgaaactcgatataatcaacgctactgtggagtcttacttaaaa
cggcggcattatcatcaggagagtaacgtttttcgaaaatctgatcgtgctggctctcaa
actagtcaagaaatgaccctaagtgaaactgttcaatgtggaacttccagagacaattcc
atagtctttagtgcaatcactaatgatgttggggttgctgatcaggcttatcacaaattg
aaaatgtgggttcagacaatatcgagtgaaaaactcagagcagaactacgaggattattg
tacccaattttttgtcacttgtatctggaaatgttgcacagtggtaaccgacaagcagct
gctcaattcttaaggatgtaccaaaatgattttgtctctgatacagaaagagactttctt
gaagaactctctagtgttttttctatccaagatatagaactaagaccatttgtcaatgcc
ttcagaaccagaaaatacaaagtggatatgtctgacaatgcacacttgtgtctccgaaag
tttcttgccaagcaaggtcatgttatattaatgcaggtgataaatacacacgtgacaatt
atcaaaaagatagaagttaatcctgacgaagatgtgggtagagatcgtggaccaagaagt
gaatcagtgatcaatggccacgtagaacaaccttctggtacaggtgtcgatcgtgaaatg
cgggaactccaagaagctattcgcttgatccgcaacaatgttcaccaacctctgcgtgtc
tataccattaataatgccaatgaaagcgccagttgcggcgtaatcacacctagcatggat
aaactagcagcaggttttagcacttcggaaataaggatgtggggtataggagacactgta
cttatgaggcctagactcaaagtgtctccatctactttaccttctaattatgcctcaact
agcgagagcttttctcctgaggatcatttggatgaagcgggagccattgtaatgcggggg
catacagatgtggtgcatgatttaagattcattcctgaagctgacgttcttctctctgta
tcaagcgacaaagaaatgagagcatggcgactgagtgattattcctgcgcagctgtatac
aatgggcacacttaccccatatggtgcatggataccagcgtttttaatttgtacgttgcg
accggatctcacgatcgtacggctaaactttggtctttggacagaactttccctctcagg
atatttgctggacattttttagatgttaattgtgttagatttcatcctaatgctcggtat
ttggcaaccggctctgcggacaaaactgtgaggctgtggagtaaggacgatggtagcttg
gtcagagtttatgtaggtgctcaatcgacgatctacagtcttgctttcagcccagatgga
aaatatctagccgctgctggtgatgacaaaagtgtatcgatatgggatttagcaaccaat
acacaattgatggaactaaaaggccatcaagacacagttatgaacttggactggagcgcc
gatggtcagtacatcgctagtgctagcatagacggagctgtaaggctttggtccactcaa
caacacatcaacaccagtaatggagataatgcaaatactcagtccggtccagacaagacc
cacacataccaaacaagttgctcaaccattctatcgctacaatattatcataggaataat
tcgctggtttgcatcggtacgtcataa
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integrated database retrieval system
