Athalia rosae (coleseed sawfly): 105693544
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Entry
105693544 CDS
T09776
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105693544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105693544
Spliceosome [BR:
aroa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
105693544
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105693544
NCBI-ProteinID:
XP_012268974
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All DBs
Position
6:15007107..15009742
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AA seq
508 aa
AA seq
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MASTKQVNKLKRKLVEHGSDTDDENDGHHKSHRSNTEAPRLCPYLDTINRQLLDFDFEKL
CSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEILD
SSLDDIKYVLNPTFNKSQIANLDKSDKLSRAIDGSMYSPGIVGMNNIKANDYCNVILQAL
SHVTPLRDFFLRESNYSNVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKKDSSIIFKTFLGHMRIYTRKIPPL
ELEESQRSELLNTIEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFN
AVAEKECKTYKENFMRRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGDI
LTPEVKAKHPYTTYDLVANIVHDGEPGQGTYRVHVLHRGTGQWYEMQDLHVTQILPQMIT
LTEAYIQIYELRKETRAQIDASQIKSGT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccaagcaagtaaataaactgaaaagaaaattggtcgagcatggaagtgat
acggacgatgaaaatgatggccaccacaagagtcacagatctaatacagaagctccacga
ttgtgtccttacctggacacgatcaatcgtcaattattagatttcgattttgaaaaattg
tgttcggtgtctctatctagaataaatgtatacgcttgtttagtttgcggaaaatatttt
caaggtagaggcaccaacactcatgcctatactcatagtgtcgcagaatcacatcatgta
tttctgaatctccatacgctgaaattttactgtctaccggacaactatgaaatccttgat
tcgtcactggatgacataaagtatgtgctaaatccgacttttaacaaatcacaaatagcg
aatttagataaaagcgacaaattgtcgagagcgattgatggctcaatgtactcgccgggt
attgttggaatgaataatatcaaagcgaatgattactgcaatgttatcctgcaggctcta
tcgcatgttacaccgttgcgggatttcttcttgagagaatccaactactctaacgtgaaa
cgacctcccggagattcgtcttatttgctcgtccaaagattcggagagctgatgagaaag
ctttggaatccgagaaattttaaagcacacgtcagtccgcacgaaatgctccaagctgtc
gttttatggagtaaaaaaaggtttcaatttacagaacaaggtgacccagttgattttcta
tcctggtttctcaatgctttacacctcgccctcaatgggacgaagaaaaaagactctagt
ataattttcaaaacatttttgggtcatatgcgaatttatacgcgaaagataccgcctctc
gaactcgaggagagccaacgcagcgagcttttaaataccattgaatacggggagaccgtt
accgaaagtccttttctctatttgacttgcgatttaccacctcccccactattcaaggat
cagtttaccgaaaacatcattccacaggtgaatttatacactctgctgaacaagttcaat
gcagtcgctgaaaaagaatgcaagacttacaaagaaaattttatgaggagattcgaaata
accgagttaccaccgtacctgattttgtacatcaagagattcacgaaaaatacgtttttc
gtcgaaaagaatccgactatcgtcaatttccccgtcaaaaacgtcgatttcggtgatatc
ttaacaccggaagttaaagctaagcatccttacacgacttacgacttggtagcgaatata
gtccacgacggtgaaccgggtcaaggaacgtacagagtacacgtgttgcacagaggtacc
ggtcagtggtacgagatgcaggatttacacgttacgcaaatcttaccgcagatgatcaca
cttacggaggcctacatccagatttatgaattgcggaaagaaactcgtgcgcaaatcgac
gcatcgcaaataaaaagcggtacgtaa
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