Athalia rosae (coleseed sawfly): 105693820
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Entry
105693820 CDS
T09776
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105693820
09122 Translation
03013 Nucleocytoplasmic transport
105693820
03015 mRNA surveillance pathway
105693820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105693820
03041 Spliceosome [BR:
aroa03041
]
105693820
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105693820
TREX complex
105693820
Spliceosome [BR:
aroa03041
]
Complex C
Other components
EJC/TREX
105693820
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105693820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
BspA_v
RRM_occluded
Btz
Motif
Other DBs
NCBI-GeneID:
105693820
NCBI-ProteinID:
XP_012269429
LinkDB
All DBs
Position
4:complement(17029542..17032114)
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AA seq
250 aa
AA seq
DB search
MKMVDKIEMSLDDIIKQNKGGRIRGGARRGRGTASPRRGVRGAPRTGGGVMRGRSRGGIG
RSAAPYTRGDVNSAWKHDMFDGVKKVGRGAIGGTGTTKLLVSNLDFGVSDSDIQELFSEF
GPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVATSEIPVTS
SIRGGSRLTGGNFTQRVQPRFRGARGASSNRGRGTGGRRGGTRGGGRTPAKTPTAEELDA
ELEAYVKEVK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtggataaaatcgaaatgagtcttgacgacatcatcaagcaaaataaaggg
ggtagaatacgaggcggtgcaagaagaggtcgggggacagcttcacctagacgaggagtc
agaggcgcgccaagaaccggtggaggtgtgatgcgaggccgaagccgaggtggaattggc
cgttcggccgccccatacactcggggagatgtaaacagtgcgtggaagcatgatatgttc
gacggagtaaagaaagtgggacgaggtgcaatcggtggcacaggcacaaccaagctgttg
gtttcaaatttggattttggggtttcagactccgatattcaggaattattcagtgaattt
ggaccattgaaatcagccgcagtacactatgatagatcaggtcgttctttggggtcggca
gatgttatctttgaaaggagagccgatgctatcaaagcgatgaaacaatataatggcgta
cctctcgatggtcgtgaaatgaacatccaagttgctacctcagaaatacctgtgacttca
tcgattcgaggagggagtaggctaactggcggtaactttacacaaagagtacaaccgcgc
ttcagaggcgcacgtggtgccagctcaaatcgaggtcgtggaactgggggtagacgtggt
ggaaccagggggggtggccggacgccagccaagaccccaactgctgaagagttggacgca
gagctggaggcgtatgtgaaggaagtgaagtaa
DBGET
integrated database retrieval system