KEGG   Athalia rosae (coleseed sawfly): 105693820
Entry
105693820         CDS       T09776                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03013  Nucleocytoplasmic transport
aroa03015  mRNA surveillance pathway
aroa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105693820
  09122 Translation
   03013 Nucleocytoplasmic transport
    105693820
   03015 mRNA surveillance pathway
    105693820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aroa03019]
    105693820
   03041 Spliceosome [BR:aroa03041]
    105693820
Messenger RNA biogenesis [BR:aroa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105693820
    TREX complex
     105693820
Spliceosome [BR:aroa03041]
 Complex C
  Other components
   EJC/TREX
    105693820
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105693820
SSDB
Motif
Pfam: RRM_1 FoP_duplication BspA_v RRM_occluded Btz
Other DBs
NCBI-GeneID: 105693820
NCBI-ProteinID: XP_012269429
LinkDB
Position
4:complement(17029542..17032114)
AA seq 250 aa
MKMVDKIEMSLDDIIKQNKGGRIRGGARRGRGTASPRRGVRGAPRTGGGVMRGRSRGGIG
RSAAPYTRGDVNSAWKHDMFDGVKKVGRGAIGGTGTTKLLVSNLDFGVSDSDIQELFSEF
GPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVATSEIPVTS
SIRGGSRLTGGNFTQRVQPRFRGARGASSNRGRGTGGRRGGTRGGGRTPAKTPTAEELDA
ELEAYVKEVK
NT seq 753 nt   +upstreamnt  +downstreamnt
atgaagatggtggataaaatcgaaatgagtcttgacgacatcatcaagcaaaataaaggg
ggtagaatacgaggcggtgcaagaagaggtcgggggacagcttcacctagacgaggagtc
agaggcgcgccaagaaccggtggaggtgtgatgcgaggccgaagccgaggtggaattggc
cgttcggccgccccatacactcggggagatgtaaacagtgcgtggaagcatgatatgttc
gacggagtaaagaaagtgggacgaggtgcaatcggtggcacaggcacaaccaagctgttg
gtttcaaatttggattttggggtttcagactccgatattcaggaattattcagtgaattt
ggaccattgaaatcagccgcagtacactatgatagatcaggtcgttctttggggtcggca
gatgttatctttgaaaggagagccgatgctatcaaagcgatgaaacaatataatggcgta
cctctcgatggtcgtgaaatgaacatccaagttgctacctcagaaatacctgtgacttca
tcgattcgaggagggagtaggctaactggcggtaactttacacaaagagtacaaccgcgc
ttcagaggcgcacgtggtgccagctcaaatcgaggtcgtggaactgggggtagacgtggt
ggaaccagggggggtggccggacgccagccaagaccccaactgctgaagagttggacgca
gagctggaggcgtatgtgaaggaagtgaagtaa

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