KEGG   Athalia rosae (coleseed sawfly): 125499716
Entry
125499716         CDS       T09776                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03020  RNA polymerase
aroa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125499716
  09124 Replication and repair
   03420 Nucleotide excision repair
    125499716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aroa03021]
    125499716
   03400 DNA repair and recombination proteins [BR:aroa03400]
    125499716
Transcription machinery [BR:aroa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125499716
DNA repair and recombination proteins [BR:aroa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125499716
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Ogr_Delta DUF4892 SR1P RIM2a_ZnF Zn_Ribbon_TF
Other DBs
NCBI-GeneID: 125499716
NCBI-ProteinID: XP_048504827
LinkDB
Position
1:29137073..29138212
AA seq 130 aa
MSKIPGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYV
NKIMHEIDELTHIVADVISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCT
NQHCSHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtctaaaatacctggatatgatacccacgacgatggtcctggctttgtcggaattaga
ttttgtcaagaatgcaacaatatgttgtacccaaaggaagataaggagaataaagtgttg
atgtatgcgtgtagaaattgcgacttcaaacagcttgcagacagcaattgtatctacgtt
aacaaaattatgcacgaaatcgatgagctgacgcatattgttgctgatgtaatatcagat
cccacactgccaagaaccgaggagcatccttgtccaaaatgcaatcaccgtgaagctgta
tttttccaagcccaaactaggcgagcagaagaagaaatgagactttattacgtctgcaca
aaccagcactgttctcatagatggacagaataa

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