Amycolatopsis roodepoortensis: NQK81_03190
Help
Entry
NQK81_03190 CDS
T08507
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NQK81_03190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aroo02000
]
NQK81_03190
Transporters [BR:
aroo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NQK81_03190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MIMI_R596-like_C
Motif
Other DBs
NCBI-ProteinID:
UUV36499
LinkDB
All DBs
Position
complement(650083..651867)
Genome browser
AA seq
594 aa
AA seq
DB search
MVAVLAASAVATVPFVPTAAAQQQGKVLRVALTTGIDHLNPFTAQLAASTQVGRFNYEFL
TLPSAEDTQPTGGIAESWKTSDDKLTWTFTIRQGMKWSDGKPITAQDPAYTFQRMLDDEN
ARTANGSYVTNFASVSAPDDKTLVIKTKAPQSSMTSLDVPIVPKHIWEPIKDLNAPSTDD
MSVVGVGSGPYLLTEYKKNEFVKFKANKDYWRGAPKVDELQLLQFKDAEAAVNALKQGEV
DVINRLTPTQFDALKGEKNITTNKAPGRRYNELIINFGVKNVLDQPIGDGNPILKDIRVR
KAIAQAIDTKTIVDKVMNGYGQPGTGVVPAIYKAYTWSPSDAEKTKFDIAAANATLDQAG
YAKGADGIRVAPGGAKLEFRLAGHANRPFDQRVAQFVSGWLKDVGIGVKQELVSDDELDD
RTTAGNYDLAISGYGTSPDPDYALSLNTCAGRPNAEGNGGSSATFFCDPRYEDLYKKQLT
EFDPAKRAELVKQAQAVLAGEYVDVVLDYDNVLEAYRSDKFSSFTKQPQPDGAILEQSGY
WGVYGATPADAAAAGAEESGNTGLWIGIGAVVLVVLVGGGVLLGRRGKSADDRE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcggtcctcgccgcttcggcggtcgcgacggtgcctttcgtgcccaccgcggcg
gcgcagcagcagggcaaggtgctccgggtggcgctcacgaccggcatcgaccacctgaac
cccttcaccgcccagctggcggcgtcgacacaggtcggccggttcaactacgagttcctg
accctgccctcggccgaggacacccagcccacgggcgggatcgccgagtcgtggaagacc
tccgacgacaaactcacctggaccttcaccatccgccaggggatgaagtggtccgacggc
aagccgatcaccgcgcaggaccccgcgtacaccttccagcggatgctcgacgacgagaac
gcccgcaccgcgaacggcagctacgtcaccaacttcgcctcggtttcggcgccggacgac
aagacgctcgtcatcaagaccaaggccccgcagtcgagtatgacctcgctcgacgtcccg
atcgtgcccaagcacatctgggagccgatcaaggatctcaacgccccctcgaccgacgac
atgtccgtcgtcggtgtcggcagcgggccgtacctgctgaccgagtacaagaagaacgag
ttcgtgaagttcaaggcgaacaaggactactggcgcggggcgcccaaggtcgacgagctg
cagctgctgcagttcaaggacgccgaggccgcggtcaacgccctgaagcagggcgaggtc
gacgtcatcaaccggctcacgccgacccagttcgacgcgctcaagggcgagaagaacatc
accacgaacaaggcaccgggccgccggtacaacgagctcatcatcaacttcggcgtcaag
aacgtcctcgaccagccgatcggtgacggcaacccgatcctgaaggacatccgcgtccgc
aaggcgatcgcgcaggccatcgacaccaagaccatcgtggacaaggtgatgaacggctac
ggccagcccggaaccggtgtcgtgcccgccatctacaaggcctacacctggtccccgtcg
gacgccgagaagaccaagttcgacatcgcggccgcgaacgccaccctcgaccaggcgggc
tacgccaagggcgcggacggcatccgcgtcgcgcccggcggcgcgaagctggagttccgg
ctcgccggtcacgcgaaccggccgttcgaccagcgtgtcgcgcagttcgtcagcggctgg
ctcaaggacgtcggcatcggtgtcaagcaggaactcgtctccgacgacgaactggacgac
cgcaccaccgcgggcaactacgacctcgcgatctccggctacggcacctcgcccgacccg
gactacgccctcagcctcaacacctgcgccggccgcccgaacgccgagggcaacggcggc
agctcggcgacgttcttctgcgacccgcgctacgaagacctgtacaagaagcagctgacc
gagttcgacccggcgaagcgcgccgagctcgtcaagcaggcgcaggccgtgctggccggt
gagtacgtcgacgtcgtcctcgactacgacaacgtgctcgaggcctaccggtcggacaag
ttctcctcgttcaccaagcagccgcagcccgacggcgcgatcctcgagcagtccggttac
tggggcgtgtacggcgccactccggccgacgcggccgccgcgggtgccgaggaaagcggc
aacaccggcctgtggatcggtatcggcgcggtcgtgctcgtggtgctcgtcggtggcggc
gtgctgctggggcggcgcggcaagtcggccgacgaccgggagtaa
DBGET
integrated database retrieval system
