Amycolatopsis roodepoortensis: NQK81_05740
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Entry
NQK81_05740 CDS
T08507
Symbol
istA
Name
(GenBank) IS21 family transposase
Organism
aroo
Amycolatopsis roodepoortensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
DUF5395
GP68
Motif
Other DBs
NCBI-ProteinID:
UUV32956
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Position
1208997..1210625
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AA seq
542 aa
AA seq
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MSPLSKVELYAAIRRDARAGMSGRALERKYNVGRRTVVKALTSAWPEPRKKPPPRPSKLD
SFKSVIDEILRADLDAPRKQRHTVKRIFDRLIDEHAMADVSYQVVRAYVAIRKPEIRTEV
GRGPAEVFIPQSHRPGQEAEVDFGEVAVRRRGTLVTCFLFSLRLSFSGKAVHKISLSGGQ
EAFFEGHEHAFRVLGGVPLGQIRYDNLKAAVVAQVLGFSRQRVETERWTAFRSHWAIEPF
YCQPGSQGAHEKGGVEGQIGWFRRTHLVPVPEVGSLAELNACVDAWDVADETRRIGARPR
TVGEMFSIEAPLLRPLPDEPFEIGRWFTPRVDRFSQISIRTNRYSVPVRVIGRRVRVLLH
ASELIVFDGRTEVARHERLLAKAGSRLELDHYLEALVRKPGALPGATALEQARAAGKFTP
VHDAWWAAARKTHGDRDGTRALIQVLLLHRHMTHEHVVAGLAAALRAGALTADAVALEAR
KAADTDITPPSASDRVVPAAAVASLTERRLTQLPPDTRPLPSVAIYDQLLPSHRTPREGT
NT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccccactgtcgaaggtagagctctacgcggcgatccgccgggacgcccgggctggt
atgtccgggcgtgctttggagcggaagtacaacgtcggccgacgtacggtggtcaaggcg
ttgacgtcggcgtggccggagccgaggaagaagccaccgcctcgcccgtcaaagctggac
tcgttcaagtcggtgatcgacgaaatcctgcgcgctgatctggatgcgccgcggaaacag
cggcacacggtgaagcggatcttcgaccggttgatcgacgaacacgccatggccgacgtg
tcgtatcaggtcgtccgcgcctacgtcgcgatccgcaagcctgagatccggaccgaggtc
ggccgcggccctgccgaggtgttcataccgcagtcgcatcggccggggcaggaggcggag
gtcgacttcggtgaggtggccgtgcggcggcgcggcacgctcgtgacgtgtttcctgttc
tcgctgcggctgtccttttccggcaaggccgtccacaagatttccctgtcgggtggacag
gaggcgttcttcgaggggcacgagcatgcgttccgggtgctcggtggtgtcccgcttggc
cagatccgctatgacaatctcaaggccgcggtcgtcgcccaggtgctggggttctcgcgg
cagcgggtggaaaccgagcggtggaccgcgttccggtcgcattgggctatcgagcccttc
tactgccagcccggttcgcagggcgcgcacgagaagggcggggtcgagggccagatcgga
tggttccgccgcactcacctcgtcccggttcccgaggttggctcgctggccgagctcaac
gcctgcgttgacgcttgggacgtcgccgatgagacccgccggatcggggcgcggccacgc
acggtcggcgagatgttctcgatcgaggcgccgctgctgcggccgttgccggacgagccg
ttcgagatcggccgctggttcaccccgcgggtcgaccggttcagccagatcagcatccgc
accaaccgctactcggtgccggttcgggtgatcgggcgccgggtccgggtgctgctgcat
gcctccgagctgatcgtgttcgacggccgcaccgaggtcgcccggcacgaacggctgctg
gccaaggccggcagccgtctcgagctggaccactacctcgaagcgctggtccgcaagccc
ggcgcattgcccggggcgaccgccctcgagcaggctcgcgcggcgggcaagttcacgccg
gtgcacgacgcctggtgggccgctgcccgcaagacccacggcgaccgcgacggcacccgc
gcgctgatccaggtcctgctgctgcaccggcacatgacccacgaacacgtcgtcgccggt
ctggccgcggcgctgcgcgccggcgctttgaccgcggacgcggtcgcgctcgaagcccgt
aaggccgccgacaccgacatcacaccaccgtcggcctccgaccgggtcgtcccggccgcg
gcggtggcctcgctgaccgaacggcggctgacccagctgccgcccgacacccggccgctg
ccgtcggtggcgatctacgaccagctgctgcccagccaccgaactcccagagaagggaca
aacacatga
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