Amycolatopsis roodepoortensis: NQK81_06220
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Entry
NQK81_06220 CDS
T08507
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQK81_06220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aroo02000
]
NQK81_06220
Transporters [BR:
aroo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NQK81_06220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA
AAA_16
AAA_33
RsgA_GTPase
AAA_29
Zeta_toxin
AAA_18
Cytidylate_kin
DUF87
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UUV33046
LinkDB
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Position
1317861..1319519
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AA seq
552 aa
AA seq
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MIHRRLLRLAGVVLAPVLLLALLSILVSACYVGGAVLTASVLADLTRGGDFATVAPAFAA
LSGVVGVRAILLWAREVAAARFGIAIRTRLRGELLRRIAALGPAWTRGERAGAITHTVVD
GVEALDAYYSRYLPQLLVTCLVPAAIAGWLFTVSVPAAAILATAVLCAVAVPRFWDTRLL
RTGRTRWSAYERLAADYLEATQSIGVLRLFGAGRRAGEALAHRGDRLHRVTMAQLRVSLV
EAGVSALALHLGLAATIVVACAGVVGGQAPAASVFLFLLCARECFRPVLDLSAHWHVGYQ
GLGAVEGIDEIMTARPRVADTGTRTEPARHGARLRLRDVGYRYPNGAGVSGIGFDCAPGS
TTGIVGPSGAGKSTIARLLVREADPQSGTIELDGTPITGYTLAALRASIGVVGQHTYLFH
GTVEENLRLARPGATHDEIRAAAHVADAIEFVEALPQGFATVLTENGTQLSGGQRQRLAI
ARAVLAAPPVLLLDEATSALDIDTERRVLTRLAEQCAGTTRIVIAHRETALRDAGAIVTI
ESGRVTGQAVHS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgatccatcgcaggctcctgcgcctggcgggtgtcgtcctcgcgcccgtcctgctgctc
gcgctgctctcgatactcgtgtcggcctgctatgtcggcggagccgtcctgacggcgtcc
gtcctcgccgatctcacccgtggcggggacttcgcgacggtggcacccgcgttcgccgcc
ttgtccggcgtcgtcggggtgcgcgcgatcctgctgtgggcgcgggaggtcgccgcggcc
aggttcggcatcgccatccgcacccggctgcgcggggagctactgcgccgcatcgccgcg
ctgggacctgcctggacacgaggagagcgcgcgggcgcgatcacgcacacggtcgtcgac
ggggtcgaagccctcgacgcctactacagccgctatctgccgcagctgctcgtgacctgt
ctggttcctgccgccatcgccgggtggttgttcaccgtgtcggtccccgccgccgcgatc
ctcgcgacggcggtcctgtgcgccgtggccgtcccccgtttctgggatacccggctgctc
cggacgggccgaacccggtggagcgcctacgaaagactggccgccgactatctggaggcg
acccagtcgatcggtgtcctccggctcttcggcgcgggacgccgggcaggcgaggcactc
gcccaccgcggtgaccgcctgcaccgcgtcacgatggcccagctgcgcgtgtcgctggtg
gaagcgggagtcagcgccctggcactgcacctcggcctcgcggccacgatcgtcgtcgcg
tgcgccggggtcgtcggcggtcaggcgcccgccgcgtcggtgttcctgttcttgttgtgc
gccagggaatgtttccgcccggtactcgacctgtccgcccactggcacgtcggttaccaa
gggctgggcgcggtcgagggcatcgacgagatcatgacggcgcggccgcgggtcgccgac
accggcacccgcaccgaacccgctcggcacggggcccggctgcggctgcgggacgtcggg
taccggtacccgaacggcgcgggcgtttccggcatcggcttcgactgcgcgccggggagc
acgaccgggatcgtgggcccgtcgggtgccgggaagagcacgatcgcccggctgctcgtc
cgcgaggccgacccgcagtcggggacgatcgaactcgacggaaccccgatcaccgggtac
accctcgccgcgttgcgcgcgagcatcggcgtcgtcggccagcacacctatcttttccat
ggcaccgtggaagagaacctccggctcgcccggcccggcgccacgcacgacgagatccgc
gccgccgcccacgtcgcggacgcgatcgagttcgtcgaggcactcccccaaggcttcgcg
acggtcctcaccgagaacgggacccagctgtccggcggccagcggcaacgcctcgccatc
gccagggcggtgctcgccgcgcctccggtgctgctgctcgacgaagcgacctcggcactg
gacatcgacaccgagagacgcgtcctcacccggctcgcggagcagtgcgccggcaccacc
cggatcgtgatcgcccaccgcgagaccgccctgcgtgacgccggcgcgatcgtcacgatc
gagtccggccgcgtcaccgggcaggcggtccactcgtga
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