Amycolatopsis roodepoortensis: NQK81_06910
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Entry
NQK81_06910 CDS
T08507
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroo03021
]
NQK81_06910
Transcription machinery [BR:
aroo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NQK81_06910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_23
HTH_3
HTH_Crp_2
HTH_24
HTH_IclR
HTH_31
DUF7343
MarR_2
MarR
KORA
HTH_28
Terminase_5
GerE
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UUV33179
LinkDB
All DBs
Position
1457902..1458690
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AA seq
262 aa
AA seq
DB search
MSGERKTLTRQADDYAQCEPLFEELSSLPEDSPRRREVRARLVTELLPLAEHIATRFSGR
GEPREDLVQVARIGLINAVDRFDPGRGHDFLSFAVPTIMGEVRRHFRDTGWSVRVPRRLK
ELHVSLSQGTAALSQRLGRAPTPTELAEHLGLEVNEVREGLLAGQAYQTLSVDKPVHDNA
TEALSLADTIGEEDHEMALVENHEALQPLLRELPKRERAILVMRFFGGYTQTQIAERIGI
SQMHVSRLLSQTLDQLRGKLSE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggggagcgcaagactctcacccggcaggcggatgactacgcccagtgcgaaccg
ctcttcgaggagctgtcgtcgctgccggaggattccccgcgccgccgggaggtgcgcgcc
cgcctcgtcaccgaactcctgccactcgccgagcacatcgccaccaggttctccggccgg
ggtgagcctcgcgaagacctggtccaggtggcgcggattggcctgatcaacgcggtcgac
cgattcgatcccggccgcgggcacgacttcctctcgttcgccgtgcccaccatcatgggc
gaggtccggcggcatttccgggacaccggctggtcggtccgggtaccgaggcggctcaag
gaactccacgtctcgctcagccagggcaccgccgcgctgtcccagcggctcggccgcgcg
ccgactccgaccgagctcgccgaacacctcgggctcgaagtcaacgaggtgcgggaagga
ctactcgccggccaggcgtaccagacgttgtcggtcgacaaaccggtccacgacaacgcc
accgaggccctctcgctcgccgacacgatcggcgaggaagaccacgagatggcgctggtg
gagaaccacgaggcgctgcaaccgctcctgcgggagctcccgaagcgggaacgcgcgatc
ctcgtgatgcggttcttcgggggttacacccagacgcagatcgcggaacggatcggcatc
tcgcagatgcacgtttcgcgtctcctgtcgcagacgctggaccagctgcgcgggaagctc
tcggagtag
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integrated database retrieval system
