Amycolatopsis roodepoortensis: NQK81_07260
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Entry
NQK81_07260 CDS
T08507
Name
(GenBank) glycoside hydrolase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo00511
Other glycan degradation
aroo00600
Sphingolipid metabolism
aroo01100
Metabolic pathways
aroo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
NQK81_07260
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
NQK81_07260
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
NQK81_07260
Enzymes [BR:
aroo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
NQK81_07260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR
BNR_3
Tli3
Sortilin-Vps10
Motif
Other DBs
NCBI-ProteinID:
UUV33245
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Position
1533297..1534817
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AA seq
506 aa
AA seq
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MKISRVAQGLFAALVATAAVGAAPATSLAAPATGDQFSAAAVGNTLVYKEKTEGYDCFRI
PAIVKANNGELLAFAEGRNGGASFCNDRGDIDLVVKRSADNGKTWSAPKVVIEGFGDTKG
NPTPIVIPSTGRIVLLSVMECVKNPDCNRIPRVSISDDHGKTWTAPKVLTTQLGFSAAPG
WLATGPSHGIVLTRGAHAGRIVAGMSYTMDGKNSGALIYSDDQGVTWKRGATDTPAASAE
LNPQEISVTELLDGRVYAAARNQANNDDKCLSGGAKNRAYAISSDGGASFSTKFSFEEDL
ITPVVQASTARMTATDKAGKYNRILFAAPSVCDRRKELVVRSSFDEGANWQGNSAGTLVW
SGDAAYSDMVQLSSGSVGVLYEAGPAGNANETIRFSTVTEPALGAPVCGGGYGVIDSAPL
GTAGTVYLSYNASNGQNCVSTMKSASAGTATATSAYLEVAGSSRITDSGSFSWFAGPVKA
AAAGKCVKWGGSAGGTSYNSPSEHCG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatctcccgcgtcgcacagggcctgttcgcggccctcgtcgccaccgcggcggtc
ggcgcagccccggccacctccctcgccgcgccggccaccggcgaccagttctcggccgcc
gcggtcgggaacacgttggtgtacaaagagaaaacagaaggttacgactgtttcagaatc
cccgccatcgtcaaggcgaacaacggcgaactgctcgcgttcgccgaaggccgcaacggc
ggagccagcttctgcaacgaccgcggcgacatcgatctcgtcgtcaaacgctccgccgac
aacggcaagacctggagcgccccgaaggtcgtcatcgagggtttcggtgacaccaaagga
aacccgacaccgatcgtgatcccgtccaccgggcggatcgtgctgctttcggtgatggaa
tgcgtcaagaaccccgactgcaaccggattccgcgggtctcgatcagcgacgaccacggc
aagacctggaccgcgcccaaggtgctcaccacgcaactcgggttcagcgccgcgcccggc
tggctcgcgaccgggccgtcgcacggcatcgtgctgacccgcggcgcgcacgcgggccgc
atcgtcgccgggatgagttacaccatggacggcaagaacagcggcgcgctcatctacagc
gacgaccagggtgttacctggaagcgcggcgccaccgacaccccggccgcgtcggccgag
ctgaacccgcaggagatcagcgtcaccgaactgctcgacggccgggtctacgccgcggcg
cgcaaccaggccaacaacgacgacaagtgtctcagcggcggcgccaagaaccgtgcctac
gccatcagctccgacggcggggcgagcttctccaccaagttctcgttcgaggaggatctg
atcacccccgtggtgcaggcctcgaccgcgcggatgaccgcgaccgacaaggcgggcaag
tacaaccggatcctgttcgccgcgccgtcggtctgcgaccgccgcaaggaactcgtcgtg
cggtcgtcgttcgacgagggcgcgaactggcagggcaactccgcgggaacgctggtgtgg
agcggtgacgccgcgtactccgacatggtccagctgtcctcgggttcggtcggcgtgctg
tacgaagcgggcccggcggggaacgccaacgagaccatccgcttctccaccgtcaccgag
ccggccctcggcgccccggtgtgcggcggcggatacggcgtgatcgactcggccccgctg
gggacggcgggcacggtttacctgtcctacaacgcttccaacgggcagaactgtgtcagc
acgatgaagagcgcgtccgcgggcaccgcgaccgcgacgtcggcctacctcgaggtggcg
ggctcgtcccggatcaccgattccggatcgttctcgtggttcgccggcccggtgaaagcg
gccgcggccggcaaatgcgtgaagtggggcggttccgcgggcgggacgtcgtacaacagc
ccctcggaacactgcggctga
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