Amycolatopsis roodepoortensis: NQK81_07875
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Entry
NQK81_07875 CDS
T08507
Name
(GenBank) ABC transporter ATP-binding protein/permease
Organism
aroo
Amycolatopsis roodepoortensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_3
AAA_22
AAA_16
AAA_24
SbcC_Walker_B
RsgA_GTPase
AAA_29
Zeta_toxin
AAA_18
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UUV33360
LinkDB
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Position
complement(1734551..1736416)
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AA seq
621 aa
AA seq
DB search
MDNTWSLMNSAMKSADVPKGLHKGTLRRVARFARPHWRRLLIFLALTVVSAVLAVSTPVL
AGKVVDAIVGGHDVSLVVWLAVVIAVLALIDAGLGLAERAQSSRIGEGIILDLRLAVYRH
VQRMPVAFFTRTRTGALVSRLNNDVIGAQRTFTATLSGLVTNVIQLVLSLVVMVTLSWQV
TLLALVLLPVFILPTRRLGRRMAELQREAGGLNASMTTQMTERFSAPGATLVKLFGDPER
ETGEFGARAGRVRDIGVRTAMLTRWFLTSLTTVSALAQALVYGLGGYLALTGALAPGTVV
ALALLLTRLYSPLTALANVRVDVMTALVSFERVFEVLDLKPMIEEKPEPRRVPEGPVSVE
FSGVRFGYPAADRYSLASLEDVSTLDHRGGEEVLHGISFRAEPGQMVALVGSSGAGKSTI
ASLLPRLYDVDAGSVKLSDVDVRDLSFASLRETVGVVTQDGHLFHDTIRANLEYARPGVT
DAEIWAALEKARLADLLRELPDGLETVVGERGYRLSGGERQRLTIARLLLAQPRVVVLDE
ATAHLDSQSEAAVGEALTDALDGRTALVIAHRLSTVRAADQILVIEHGGIVERGTHEELL
AREGRYAALYLTQFSEEPAAA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacctggtcgctgatgaactcggcgatgaagtcggccgacgttccgaagggg
ctgcacaagggcacgctgcgccgggtcgcgcggttcgccaggccgcactggcggaggctg
ctgatattcctggcgctcaccgtcgtctcggcggtgctggcggtcagcaccccggtgctg
gcagggaaggtggtcgacgcgatcgtcggcgggcacgacgtctcgctcgtggtgtggctc
gccgtcgtgatcgccgtgctggcgctgatcgacgccgggctcgggctggccgaacgggcg
cagtcgtcgaggatcggcgaggggatcatcctcgacctgcggctcgcggtgtaccgccac
gtgcagcggatgccggtcgccttcttcacgcgcacccgcaccggcgcgctggtgagcagg
ctcaacaacgacgtcatcggcgcgcagcggacgttcaccgcgacactgtccggtttggtc
accaacgtgatccagctcgtactgtcgctcgtggtcatggtgacgctgtcgtggcaggtc
accctgctggcgctggtgctgctgccggtgttcatcctgccgacgcggcgcctcgggcgg
cggatggccgagctgcagcgggaggccggcgggctcaacgcgtcgatgaccacgcagatg
accgaacggttctccgcgccgggcgcgacgctggtcaagctgttcggcgacccggagcgc
gagaccggcgagttcggggcgcgggccggacgcgtgcgcgacatcggcgtgcgcacggcg
atgctgacgcgctggttcctcaccagcctgaccacggtttccgcgctcgcgcaggcgctt
gtctacggtttgggcggctatctcgcgctgaccggggcactcgcacccggcaccgtcgtg
gcgctcgcgttgctgctgacgaggctgtactcgccgctcaccgcgctggcgaacgtccgg
gtggacgtgatgaccgcgctggtgtcgttcgagcgggtcttcgaggtgctcgacctcaag
ccgatgatcgaagagaagccggagccgcgccgcgttcccgaaggcccggtctcggtggag
ttctccggcgtccggttcggctacccggcggcggaccggtactcgctggcgtcgctggag
gacgtgtccactttggatcaccggggtggcgaggaggtgctgcacggcatcagcttccgc
gcggaacccgggcagatggtggcgctggtcggttcgtccggcgcgggcaagtcgacgatc
gcctcgctgctgccgcgtctctacgacgtcgacgccgggtcggtcaaactgtccgatgtg
gacgttcgcgacctgagtttcgcgtcgctgcgggaaaccgtcggtgtggtgacccaggac
gggcacctcttccacgacacgatccgcgcgaacctcgagtacgcgcggcccggcgtcacc
gacgccgagatctgggcggcgctggagaaggcacggctggccgacttgctccgggaacta
ccggacgggctggagaccgtggtgggggagcggggttaccggctctccggcggggagcgg
cagcggctgaccatcgcccggctgctgctggcgcagccaagggtcgtcgtcctcgacgag
gcgaccgcgcatctggactcgcagtccgaggcggccgtgggcgaggcgctgaccgacgcg
ctcgacgggcggaccgcgctggtcatcgcgcaccggttgtcgacggtccgggcggccgac
cagatcctggtcatcgagcacggggggatcgtcgagcgggggacgcacgaagagcttctc
gcgcgcgaagggcgctacgcggcgctgtacctgacgcagttctcggaggaacccgcggca
gcgtga
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