Amycolatopsis roodepoortensis: NQK81_08360
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Entry
NQK81_08360 CDS
T08507
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQK81_08360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_08360
Enzymes [BR:
aroo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQK81_08360
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQK81_08360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
UUV33449
LinkDB
All DBs
Position
complement(1846868..1848958)
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AA seq
696 aa
AA seq
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MSSSPEPTPLWDLPEPKAEPARKAKPARAKTASRRGAQNPAPENPVARIVVDIPLTHLDR
TFDYRIPEKLHEAAVPGCRVRVRFAGQLVDGYLVERADTTEFTGKLAYIDRVTSSEPVLP
PALHTLCRSVADRYGGTLSDVLRLAIPSRHAKVEAEPPAEPAPSPEPPETTAWEKYQSGP
AFLEAVAERRPANAVWQALPGEDWPRRLAEAAAVAAAAGRGVVMVVPDHRDLTRLHDACV
SLLGADSVVALIAGLGPAERYRRWLAVLRGAVRVVVGTRAAMFAPVADPGLFVVWDDGDD
VHLDQHAPYPHVRDVLMDRAHAAKGSMLVAGFARTAEAQFLVESGWAQPLVAARPELRAA
APRVTPVGEDFDVARDEAAKAARLPSVAFEAARQSLAGGFPVLVQVPRRGYVPGLACGNC
RTSAHCRRCAGPLSLPGGLIDGSPRPPACRWCGVPETNFHCAACGSVRLRAVVVGSKRTA
EELGRAFSGFPVRTSGATEVLASVPGKPALVVCTPGAEPVAEGGYGAALLLDGWALLGRQ
DLRAGEETLRRWMAAAALVRPGTDGGRVFVGAEAGLSVVQALVRWDPGWHASLELAERRE
LGFPPAMRMASIEGTPDAVAGLLDDLALPETGEVLGPVPLGEVDEDGNAERERALVRVAR
PDGKALAAAVHAAAARRDARKAPEPIRIQLDPLELI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagtcccgaaccgaccccgctgtgggaccttccggagccgaaagccgagccg
gcgcggaaggccaagccggcgcgcgcgaaaacggccagccgccgcggcgcgcagaacccc
gcgcccgagaacccggtcgcccggatcgtcgtggacatcccgctcacgcacctcgaccgc
accttcgactaccggatccccgagaagctgcacgaagccgccgtacccggctgccgggtc
cgcgtccggttcgcgggtcagctcgtcgacgggtacctcgtcgaacgcgccgacaccacc
gagttcaccgggaagctcgcgtacatcgaccgggtgacctccagcgagccggtgctgcct
ccggcgctgcacacgctctgcaggtccgtcgcggaccggtacggtggcacgctcagcgac
gtcctgcggctcgcgatcccgtcccggcacgcgaaggtcgaggccgaaccgcccgccgaa
cccgcgccgtcaccggagccgcccgaaaccaccgcctgggagaagtaccagagcggtccg
gcgttcctggaggccgtcgcggaacggcgtcccgccaacgccgtctggcaggcgcttccg
ggcgaggactggcctcgccgcctcgccgaagccgccgccgtcgcggccgccgctggccgg
ggtgtcgtcatggtggttcccgaccatcgcgacctgacacggctccacgacgcgtgtgtt
tccttgctgggcgccgattccgtggtcgcgctgatcgccgggctggggcccgccgagcgc
tatcgccggtggctcgcggtgctgcgcggcgcggtgcgcgtcgtcgtcggcacacgcgcg
gcgatgttcgcgccggtcgccgatcccggcctgttcgtggtgtgggacgacggcgacgac
gtccacctcgaccagcacgcgccgtacccgcacgttcgcgacgtgctgatggatcgcgcg
cacgccgcgaagggctccatgctcgtcgccgggttcgcgcggaccgccgaagcgcaattc
ctggtggaatcgggctgggcgcagccgctcgtggcggcccgccccgaactgcgggcggcc
gcgccgcgggtcacgccggtcggtgaggacttcgacgtcgcccgggacgaagcggcgaag
gccgcgcggctcccatcggtcgccttcgaggcggcgcggcagtcgctggcgggtggattc
cctgtgctggtccaggttccgcgtcgcggttacgtcccggggctcgcttgtggcaactgc
cggacgtcggcgcattgccgtcgttgcgccggcccgttgtccttgcccggcgggctgatc
gacggctcgccgaggccgcccgcgtgccggtggtgcggtgtccccgagacgaacttccat
tgcgccgcttgcggttccgtccggctgcgggcggtcgtcgtcggctccaagcggaccgcg
gaggaactgggccgggcgttctccggcttccccgtgcggacctcgggcgcgacggaggtt
ttggcgtcggtgcccggaaaaccggcgctggtggtgtgcacgcccggagccgagccggtc
gcggagggcggctacggcgcggcactgctgctcgacggctgggcgctgctcggacggcag
gacctgcgcgcgggggaggagaccctgcgccgctggatggcggccgcggccctggtgcgg
ccggggaccgacggcggtcgcgtgttcgtcggcgcggaagcgggcttgtcggtcgtccag
gctctggtgcgctgggacccgggctggcacgcgagcctggaactggccgagcggcgcgaa
ctcgggttcccgcccgcgatgcggatggcgagtatcgagggcacgccggacgcggtcgcc
ggactgctcgacgacctcgccctcccggagaccggtgaggtgctgggcccggtgccgctc
ggcgaggtcgacgaggacggcaacgccgaacgcgagcgggccctggtgcgcgtcgcgcgc
ccggacgggaaggcgctcgccgccgccgtccatgccgcggccgcgcgccgggacgcgcgc
aaggccccggaacccatccggatccagctggaccccctggagctcatctga
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