Amycolatopsis roodepoortensis: NQK81_10565
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Entry
NQK81_10565 CDS
T08507
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo00300
Lysine biosynthesis
aroo00470
D-Amino acid metabolism
aroo01100
Metabolic pathways
aroo01110
Biosynthesis of secondary metabolites
aroo01120
Microbial metabolism in diverse environments
aroo01230
Biosynthesis of amino acids
Module
aroo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NQK81_10565 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NQK81_10565 (dapF)
Enzymes [BR:
aroo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NQK81_10565 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UUV33870
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Position
complement(2290458..2291282)
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AA seq
274 aa
AA seq
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MGGIEFLKGHGTQNDFVLLPDPDGRLELTEARVAALCDRQRGLGADGVLRIVRSAALGVE
SGGEWFMDYRNADGSIAEMCGNGVRVFVRHLVDSGLVSERDFVIGTRAGDRPVQMHADGS
VTVQMGPATITGTSVTVVAGQPFSGVAVNVGNPHLVSVVEDDVDVLDLRDQPDFDSDVFP
EGVNLEFINLLGDDALKMRVHERGVGETRSCGTGTVAAVAAALHLAGTDTGEATVDIPGG
RVVVEVHRGGSTLTGPAEIVARGELDGTWWAGLG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcatcgaattccttaagggacacggcacacagaacgatttcgtgctgcttccc
gaccccgacggccgcctcgagctgaccgaagcgcgggtggcggcgctgtgcgaccgtcag
cgtggtctcggcgccgacggtgtgctccggatcgtgcggtcggccgcactgggtgtcgag
tccggcggcgaatggttcatggactaccgcaacgccgacgggtccatcgcggagatgtgc
ggcaacggtgtccgggtcttcgtccgtcatctggtcgattccggcctcgtgtccgagcgc
gacttcgtcatcggcacccgcgccggcgaccggccggtccagatgcacgcggacggatcg
gtgaccgtgcagatggggccggcgacgatcaccggtacctcggtcaccgtggtcgcgggg
cagccgttctccggtgtcgcggtgaacgtcggcaatccgcacctggtgtcggtcgtcgag
gacgacgtcgacgtgctggatctgcgcgaccagcccgacttcgactccgacgtgttcccg
gaaggcgtgaacctcgagttcatcaacctgctgggcgacgacgcgctgaagatgcgcgtc
cacgaacgcggcgtcggcgagacgcggtcctgcggcaccggcacggtcgccgcggtcgcc
gccgcgctgcacctcgccggaaccgacaccggtgaggcgaccgtcgacatccccggcggt
cgcgtggtggtcgaggtccaccgcggtgggtccacgctgaccggaccggcggagatcgtc
gcgcgcggcgaactcgacggaacctggtgggccgggctcggttag
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