Amycolatopsis roodepoortensis: NQK81_11220
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Entry
NQK81_11220 CDS
T08507
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aroo03016
]
NQK81_11220 (truB)
Enzymes [BR:
aroo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NQK81_11220 (truB)
Transfer RNA biogenesis [BR:
aroo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQK81_11220 (truB)
Prokaryotic type
NQK81_11220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UUV33990
LinkDB
All DBs
Position
complement(2424315..2425238)
Genome browser
AA seq
307 aa
AA seq
DB search
MSRPNQAQAKKRPAPPPGLVIVDKPSGMTSHDVVARARRFMGTRKVGHAGTLDPMATGVL
VLGIERATKLLGHLALDRKTYLATLSLGLSTTTDDAEGEPIAEAAPDVVEKITDEAIAAG
IAALTGDIQQVPSAVSAVKIDGKRAYARVRAGEEVVIPPRPVTVHRFDLLATRREAGRIE
LDAVVECSSGTYVRALARDLGAGLGVGGHLLALRRTTVGPFTLAKARTLDQLEDKPELSL
DLDAAVAAAFPRRDLDVRMAQAVRYGQRVPAAGIEGTYGMFGPDGRVLALAADEGELARS
VVVLLPA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgccccaatcaggctcaagccaagaaacgtcccgccccgccgcccggcctcgtc
atcgtcgacaaaccgtccgggatgacctcccacgacgtcgtcgccagggcgcggcgcttc
atgggcacccgcaaggtcgggcacgccggcaccctcgacccgatggccaccggcgtcctc
gtgctcggcatcgaacgcgcgacgaaactcctcggccacttggcgctggaccgcaagacc
tacctcgcgaccctctccttgggactgtccaccacgaccgacgacgccgagggcgagccg
atcgccgaagccgccccggacgtcgtcgagaagatcaccgacgaagcgatcgcggccggg
atcgccgcgctgaccggcgacatccagcaggtgccgagcgcggtcagcgcggtcaagatc
gacggcaaacgcgcgtacgcccgggtccgcgccggcgaagaggtcgtcatcccgccgcgt
ccggtcaccgtgcaccgcttcgacctgctcgccacccgccgcgaggcgggccggatcgaa
ctcgacgccgtcgtcgaatgctcgtcggggacctacgtccgggcgctggcccgcgatctc
ggcgccgggctgggcgtcggcgggcatctgctcgcgttgcggcgcaccacggtcgggccg
ttcacgctcgccaaggcccgcaccctcgaccagctcgaagacaagccggaactgtcgctg
gacctcgacgccgccgtcgccgccgcgttcccgcgccgcgatctggacgtccgcatggcg
caggcggtccgatatggacagagggtgcccgcggccgggatcgagggcacgtacgggatg
ttcggaccggacggccgggtgctcgcgctcgccgcggacgaaggcgaactggcccggtcg
gtggtcgtgttgctgcccgcctag
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