Amycolatopsis roodepoortensis: NQK81_12425
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Entry
NQK81_12425 CDS
T08507
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03030
DNA replication
aroo03430
Mismatch repair
aroo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQK81_12425 (holA)
03430 Mismatch repair
NQK81_12425 (holA)
03440 Homologous recombination
NQK81_12425 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroo03032
]
NQK81_12425 (holA)
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_12425 (holA)
Enzymes [BR:
aroo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQK81_12425 (holA)
DNA replication proteins [BR:
aroo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQK81_12425 (holA)
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQK81_12425 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
UUV34213
LinkDB
All DBs
Position
complement(2659961..2660944)
Genome browser
AA seq
327 aa
AA seq
DB search
MTTQASAPSPLVLVLGEEELLIERAVRSASDAAKAADPTADLTRIRVSDLTVPALAEMVS
PSLFAEGRVIVLESAHDISQELADGVMAYVKAPADGIVLVVVHSGGGRSKAAKGLPTALK
KAGAEVVECPKLTKPAERESFVRNEVRRVGGKIDGAAVLALIDAVGSDLRELSSAATQLV
ADAGGAVDEQAVRRYHRGRADVNGFAVAEKAVAGDKAAALESLRWAMQLGVPHVLVADAL
ADAVRTIARVSGAGRGNPNQMAGELGMPPWKVRKAQGQARGWGQDGLATAMRVVARLNAE
VKGVAANPEYALERAVLEVVDAHGTSR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgcaagcttccgccccatcgccgctggtcctggttctcggtgaggaagagctg
ctgatcgaacgcgcggtccgcagcgcttcggacgcggccaaagcggccgatccgacggcg
gatctcacccggatccgggtgtcggacctcacagtcccggcactcgcggagatggtcagc
ccctctctattcgccgaagggagggtgatcgtcctcgaatccgcgcacgacatctcgcag
gagctcgccgacggggtgatggcctacgtcaaggcccccgccgacggcatcgtgctcgtc
gtcgtgcacagcggaggtggccggagcaaggccgcgaaggggctccccaccgccttgaag
aaggccggtgcggaggtcgtcgagtgcccgaaactgaccaagcccgccgagcgggaatcc
tttgtccgcaacgaggtccgccgggtcggcgggaagatcgacggtgcggccgtgctcgcg
ttgatcgacgcggtcggttcggatctgcgtgaactgtcgtcggccgcgacccagctggtc
gcggacgccggcggagcggtcgacgagcaggcggtccggcgctatcaccggggtcgcgcg
gacgtgaacgggttcgccgtggcggagaaggccgtcgccggggacaaggcggcggcgctg
gagtcgctgcgctgggcgatgcagctgggcgtgccgcacgtgctggtcgcggacgccctc
gccgacgccgtccggacgatcgcgcgggtgtccggtgccggtcgcggcaacccgaaccag
atggcgggtgagctgggcatgccgccgtggaaggtgcgcaaggcgcagggacaggcccgc
ggctggggccaggacgggctcgccaccgcgatgcgggtggtcgcccggctcaacgccgag
gtcaagggagtcgcggccaacccggagtacgcgctggagcgtgccgtcctggaggtcgtc
gacgcccacggtacaagccgctga
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