Amycolatopsis roodepoortensis: NQK81_12805
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Entry
NQK81_12805 CDS
T08507
Name
(GenBank) HAMP domain-containing protein
Organism
aroo
Amycolatopsis roodepoortensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
ATG17_like
GAF
Laminin_II
YscO-like
ATG14
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
UUV34286
LinkDB
All DBs
Position
2750840..2755465
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AA seq
1541 aa
AA seq
DB search
MDEATLERLLAAARDLGDGNFRRRLVAHGDGLAAQLAGAFNDIAERNQRLVTELLRVREA
VGKEGRLTERVAAEIGPGGWATAVDVVNGLIEDVSRPTAELNRVLGAVAEGDLSEPMPLE
VGGRPLQGQFAEVAKTVNGLIKQLSRFATEVTRVAREIATEGRLGGQAEVPGVAGTWRDL
TDNVNVMASNLTDQVRNIAQVTTAVARGDLTQKINVDARGEILELKNTVNIMVDQLSSFA
DEVTRVSREVGSEGRLGGQAQVPGAAGTWRDLTDSVNLMADNLTDQVRNIAQVATAVAQG
DLSQKINVDAKGEILELKNTLNTMVDQLSSFADEVTRVAREVGSEGRLGGQATVPGVAGT
WRGLTDSVNQMADNLTDQVRNIAQVTTAVAKGDLTQKITVDARGEILELKTTVNTMVDQL
SSFADEVTRVAREVGTEGQLGGQAQVPGVAGTWRDLTGSVNFMANNLTAQVRNIAQVATA
VAKGDLSQKIAVDAKGEILELKNTLNTMVDQLSAFADEVTRVAREVGSDGRLGGQAQVPG
VAGTWKDLTDNVNFMAKNLTDQVRNIAQVTTAVAKGDLTQKIIVDARGEILELKNTVNIM
VDQLSAFADEVTRVSREVGTEGKLGGQAQVRGVAGTWKDLTDNVNVMATNLTDQVRSIAT
VTTAVANGDLSKKISIDAQGEVAVLAETINSMVETLRAFADEVTRVAREVGTEGILGGQA
RVPNVAGTWKALTDNVNVMADNLTGQVRSIATVTTAVAQGDLSKKIDIDARGEILELKTT
INTMVDQLSAFASEVTRVAREVGTDGTLGGQAEVPGVAGTWSRLTESVNQLAGNLTTQVR
AIAQVATAVTAGDLTRHITVDASGEVAELKDNINQMIANLKETTRANREQDWLKTNLARL
SALMQGHRDLASVASLILSELTPLVSAQQGAFFLAREDEQEEVVLESIATYGLAKSQTGL
RFSPGESLIGQAAVDRRTILVHEAPPEYALISSGLGSAAPVNVIVLPVLFQGEVLGVLEL
ATINAFSTVHIDLLEQLKETIAVNVSTIQSNSRTEALLTESQRLAQELRARSEQLQAQQR
ELRRSNTDLAEKAALLAQQNRDIEVKNSEIEQARQELEERAGQLTMASQYKSEFMANMSH
ELRTPLNSALILAKLLSENPDGNLSEKQVQFARTIYSAGSDLQQLINDILDMAKVEAGHL
DLQMSDVTLPELVEYVESICRPLTSDKGLEFAVLIDPPVPSSIHTDEHRVQQVLRNLLSN
AAKFTDEGGVRLHIRMADPGEVEADSLRNAPGVLAFAVEDTGIGIAPDKLAIIFDAFRQA
DGTTSRKYGGTGLGLSISQQLTELLGGELRVRSEPGKGSTFTLYLPVSASNLVVPTTAAA
GGVPLIMAVPQVAPSAPAQRFHGEKILIVDDDLRNVFALAAVLERNGLEVIYAETGVAGI
RALERHEDTALVLMDVMMPELDGNATITAIRAEAAHEDLPVIAVTAKATAEDKARTLASG
ADDYVTKPVDTDKLLDLIAAHLEADAASSGLSQAVAPAESD
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaagcgaccctggaacgcctgctcgcggcggctcgtgacctcggggacggcaac
ttccgccggcggctcgtggcgcacggcgacgggctcgcggcccagctcgcgggcgccttc
aacgacatcgccgagcggaaccagcgactggtgaccgaactcctgcgcgtccgcgaagcg
gtcggcaaggaaggcaggctgaccgagcgggtggcggccgagatcggccctggcggctgg
gccaccgcggtcgacgtcgtgaacggcctgatcgaggacgtgagcaggcccacggccgag
ctcaaccgcgtcctcggggcggtcgccgagggcgatctgtccgagccgatgcccctagaa
gtcggcgggcggccgctgcagggtcagttcgccgaagtcgcgaagacggtcaacggcctg
atcaaacagctttcgcggttcgcgaccgaggtcaccagagtggcccgcgagatcgccacc
gaaggacggctcggcggccaggccgaggtcccgggcgtggcgggcacctggcgtgatctc
accgacaacgtcaacgtcatggccagcaacttgaccgaccaggtgcgcaacatcgcccag
gtgaccaccgcggtggcgcggggcgatctgacccagaagatcaacgtcgacgcgcgcggc
gagatcctggagctcaagaacaccgtcaacatcatggtcgaccagctctcgtcgttcgcc
gacgaagtgacccgggtttcccgcgaggtgggtagcgaaggccggctcggcggccaggcg
caggtccccggcgccgcgggcacgtggcgcgacctcaccgactcggtgaacctgatggcg
gacaacctgaccgaccaggtccgcaacatcgcccaggtggcgaccgcggtcgcccagggc
gatctctcgcagaagatcaacgtcgacgccaagggcgagatcctcgagctcaagaacacg
ctgaacaccatggtggatcagctgtcctcgtttgcggacgaggtcacgcgggtggcgcgt
gaggtcggcagcgaaggccgtctgggcggccaggcgaccgtgccgggcgtcgcgggcacc
tggcgcgggctcaccgattcggtgaaccagatggccgacaacctgaccgaccaggtccgc
aacatcgcccaggtcaccaccgcggtggcgaagggcgacctgacgcagaagatcacggtc
gacgcgcgcggcgagatcctggagctcaagacgaccgtcaacacgatggtcgaccagctc
tcgtcgttcgccgacgaggtcacgcgggtggcgcgcgaggtcggcacggaaggtcagctc
ggcggccaggcgcaggtaccgggggtcgccgggacgtggcgcgacctcaccgggtcggtc
aacttcatggcgaacaacctcaccgcgcaggtccggaacatcgcccaggtggcgacggcg
gtggcgaagggcgatctctcgcagaagatcgccgtcgacgccaagggcgagatcctcgaa
ctcaagaacacgctgaacaccatggtggatcagctgtcggcgttcgcggacgaggtcacc
cgcgtcgcccgtgaggtcggcagcgacgggcggctcggcggccaggcgcaggtgcccggc
gtcgccgggacctggaaggacctcaccgacaacgtcaacttcatggcgaagaacctgacc
gaccaggtccggaacatcgcccaggtgaccacggcggtggcgaagggcgacctgacgcag
aagatcatcgtcgacgcgcgcggcgagatcctggagctcaagaacaccgtcaacatcatg
gtcgaccagctgtcggccttcgccgacgaagtcacgcgggtgtcccgcgaggtcggcacc
gagggcaagctcggcggccaggcgcaggtgcgcggcgtcgccgggacctggaaggacctc
acggacaacgtcaacgtcatggccaccaacctcaccgaccaggtgcgcagcatcgcgacg
gtgacgacggcggtggcgaacggcgacctgtcgaagaagatctcgatcgacgcgcagggc
gaggtcgcggtcctcgccgagacgatcaacagcatggtcgagacgctgcgcgcgttcgcc
gacgaggtcacccgggtcgcccgcgaggtgggtacggaaggcatcctcggcggccaggcc
cgcgtgccgaacgtggcgggcacgtggaaggcgttgacggacaacgtgaacgtcatggcc
gacaacctgaccggccaggtccgcagcatcgcgacggtgaccaccgcggtggcgcagggc
gatctgtcgaagaagatcgacatcgacgcgcgcggcgagatcctcgaactcaagaccacc
atcaacacgatggtcgaccagctctcggccttcgcctccgaagtcacccgtgtcgcccgc
gaggtcggcacggacggcacgctcggcggccaggcggaggtgcccggtgtcgcgggcacg
tggtcgcggctgaccgaaagcgtgaaccagctggccgggaacctgaccacccaggtgcgg
gcgatcgcgcaggtggcgaccgcggtgaccgccggcgatctcacccggcacatcaccgtc
gacgcgtccggggaggtggccgagctcaaggacaacatcaaccagatgatcgcgaacctg
aaggagaccacccgcgcgaaccgtgagcaggactggctcaagaccaacctcgcgcggctg
tccgcgctgatgcagggtcaccgggacctcgcttcggtggcgtcgctgatcctgtccgag
ctgaccccgctcgtgtccgcgcagcagggcgcgttcttcctcgcccgtgaagacgaacag
gaagaggtggtcctggagagcatcgcgacctacgggctggcgaaatcccagaccgggctg
cggttctcccccggcgaatcgctcatcggacaggccgccgtcgaccgccgcacgatactg
gtccacgaagccccgccggagtacgcgctcatctcgtccgggctgggttcggccgctccg
gtgaacgtgatcgtgctgccggtcctgttccagggcgaggtgctcggcgtgctggaactg
gcgaccatcaacgccttcagcaccgtccacatcgacctgctggagcagctgaaggagacc
atcgcggtcaacgtcagcaccatccagtcgaactcccgcaccgaggcactgctgaccgaa
tcccagcgcctggcacaggaactgcgcgcccggtcggagcagttgcaggcacagcaacgg
gaactgcgccggtccaacacggatctcgcggagaaggcggcactgctcgcgcagcagaac
cgcgacatcgaggtcaagaacagcgagatcgaacaggcgcggcaggagctcgaagagcgt
gccgggcagctgaccatggcgtcgcagtacaagtccgagttcatggcgaacatgtcgcac
gagctgcggaccccgctcaacagcgcgctgatcctcgcgaaactgctctcggagaacccg
gacgggaacctgtcggagaaacaggtccagttcgcgcggacgatctactcggcgggcagc
gacctgcagcagctgatcaacgacatcctcgacatggccaaggtcgaggccggtcacctg
gacctgcagatgtccgacgtcacgctgcccgaactggtcgagtacgtcgaatcgatctgc
cgtccgctcacctcggacaagggcctggagttcgccgtcctgatcgacccgccggtgcct
tcgtcgatccacaccgacgaacaccgcgtacagcaggtgctgcggaacctgctgtccaac
gcggcgaagttcaccgacgagggcggcgtgcgcctgcacatccggatggccgatccgggc
gaggtcgaagccgactcgctccgcaacgcccccggcgtgctcgcgttcgccgtcgaggac
accgggatcggcatcgcgccggacaagctcgcgatcatcttcgacgcgttccgccaagcc
gacggaaccaccagccgcaagtacggcggcaccgggctgggcctgtcgatcagccagcag
ctcacggaactgctcggcggcgaactgcgcgtccgcagcgaacccggcaagggcagcacg
ttcaccctgtacctgccggtgagcgcgtcgaacctggtcgtcccgaccaccgccgcggcc
ggcggggtcccgctgatcatggcggtgccgcaggtggccccctccgcgccggcacagcgg
ttccacggtgagaagatcctgatcgtcgacgacgacctccggaacgtcttcgcgctggcc
gccgtgctggaacgcaacggcctggaggtcatctacgccgagaccggcgtcgccggcatc
cgggcgctggaacggcacgaggacaccgcgctcgtcctgatggacgtgatgatgccggaa
ctggacggcaacgccacgatcaccgccatccgcgcggaggccgcgcacgaagacctgccc
gtgatcgccgtcacggcgaaggcgaccgcggaggacaaggcgcgaacgctcgcttcgggc
gcggacgactacgtgaccaagcccgtcgacacggacaagctgctggacctgatcgccgcg
cacctggaggcggatgccgcgtccagcggcctctcgcaggccgtggcccccgccgagtcg
gattga
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