Amycolatopsis roodepoortensis: NQK81_14900
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Entry
NQK81_14900 CDS
T08507
Name
(GenBank) tetratricopeptide repeat protein
Organism
aroo
Amycolatopsis roodepoortensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
TPR_12
TPR_2
TPR_MalT
NB-ARC
Trans_reg_C
TPR_1
AAA_16
AAA_22
TPR_14
ParA
TPR_16
TPR_19
Zeta_toxin
NatA_aux_su
DUF6584
Motif
Other DBs
NCBI-ProteinID:
UUV36192
LinkDB
All DBs
Position
3186078..3188984
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AA seq
968 aa
AA seq
DB search
MDGQVVPLGGPKPRLLLAALLLQPNVVVSTELLIEVLWPSSAPRSAAANIRTYVHSLRKR
LADHDPELGERIGSRASGYILKAAPDEIDHIRFGELAARAQDALGHGEAESALDLLDQAE
ALWRGEVLEGLPHDHGWGATVARLTELRLAVQEQRLRARIELGRTAEAVAELRGLVTEHP
LREELWQQLIVALRADGRTADAIEAYETAEKVLAEELGTEPGPRLRELRASLVLTPSATQ
DAVAAALTVPMTPVCQLPLDLPDFTGRDEVVSALVGLFHERRTQGKPAIAVLSGAPGIGK
SSVAIRVAHAVRDDFPDGQLHVDLAGTSSSPRPPMTVLAELLRALGVPDAGLPRDLPERA
ALLRSRLATLRMCVVLDDAGSAAQVRPLLPGAGSCAMLITSRIRMPDLAGATSVDVDLLP
EADAAKLLEGIVGTERVAAEPECATAILRHCGYLPLAIRVAGAKLTHRPGWTLRVLADRL
RDERRRLDELRVGDLAVRASVTLSYDLLPMSAATAFRGLGGLGSVQFPGWVVAALLGRTH
GEDVLDVLVDAHLVELSGSDATGEPRYRLHDLLRCYALELRAQDVPLKARDATKRVLEGY
LALAVEAADRMPIHFFGLYRDDTAVQPALPPGTAHLIEDPAAWFAAERHTCVAAVSLAAD
LGFDSLAWRLAAALAPYFDQRGHQDDWMHTHAVALAAARRSGEVRGEAIIQRNLGQIQLY
QDSYAEALVAFEQSQLLFDKIGDTRGAAIALAGLGTVLRIKGEDTVALEHCHAALDQFSA
AGDPHGEAVARIAIGAVWLARRRFADAERWFTEALEQSALIGDRHREAHALKRLAMLRQH
QGNLSGARERVDRAIAIFNELGDDHCVGYANQNLGELYLHSGDLAHAQLLLVNSLSVHRR
NGDRRSEAEVSQLLGELHEALSQPERSRTYSERALALWRELSARPQESALASRLQEAAEA
SYDDSASA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
gtggacgggcaggtggtgccgctcggcgggcccaaaccccggctgctgctggccgctctc
ctgctccagcccaacgtcgtcgtctccaccgaactgctgatcgaggtcctgtggccttcg
tcggcgcctcgttcggcggcggcgaacatccgcacctacgtccattcgctccgcaaacgc
ctcgccgaccacgaccccgaactcggggagcgcatcggaagccgggcatccggatacatc
ctcaaggccgcacccgacgagatcgaccacatccgcttcggcgaattggccgcccgcgcg
caggacgcgctcggccacggggaagccgaatcggccctcgacctgctggatcaagcggaa
gcgctgtggcgcggggaagttctcgaaggcctcccccacgatcatggctggggcgcgacc
gtcgcccggctgacggagctgcggctcgcggtccaggaacagcggcttcgggcgaggatc
gaactcggccggaccgccgaggccgtcgccgagctgcgcggcctggtcaccgaacacccc
ctgcgcgaagagctctggcagcagctgatcgtcgcgctgcgggccgacggccgcacggcc
gacgcgatcgaggcctacgaaacggccgaaaaggtgctcgcggaggaactcggcaccgaa
ccgggcccgcggctgcgggaactgcgggcctcactcgtcctcacgccgtccgcgacccag
gacgcggtggccgccgccctcaccgtgccgatgacaccggtctgccagctgccgctggac
ctgccggacttcaccggccgcgacgaggtggtcagcgcgctcgtcggcctcttccacgag
cgtcgtacccagggaaagcccgcgatcgcggtgctgtccggggcgccggggatcggcaag
tcctccgtcgcgatccgggtggcgcacgcggtccgtgacgacttcccggacggtcagctg
cacgtcgacctcgccgggacgtcgtcctcgccccgtcccccgatgaccgtgctcgccgag
ttgctccgcgcgctgggggttcccgacgcggggctgccgcgtgatctccccgagcgcgcg
gcgttactgcggtcccggctcgcgaccctgcggatgtgcgtcgtcctcgacgacgccggc
agcgccgcgcaggtccgcccgctgctgcccggcgcgggttcctgcgcgatgctgatcacc
agccggatccggatgccggatctggccggggcgacttccgtcgacgtcgacctgctgccc
gaagccgacgccgcgaagctgctcgaaggcatcgtcggcacggaaagggtcgcggcggag
ccggagtgcgcgaccgcgatcctgcgccactgcggatatctgccgctcgcgatccgggtc
gccggggcgaagctgacccaccggccgggctggacgttgcgcgtactggccgaccggctg
cgcgacgaaagacgaagattggacgaactccgcgtcggcgatctcgccgtacgggccagt
gtcacgctcagctacgacctcctcccgatgtcggcggcgaccgcgttccgcggcctcggc
gggctcgggtcggtccagttccccggctgggtggtcgcggccctgctcggccgtacgcat
ggtgaggacgtcctcgacgtgctggtggacgcccacctggtcgagctcagcggctcggac
gccaccggcgagcctcgctaccgcctgcacgacctgttgcggtgttacgccctcgaactc
cgcgcgcaggacgttccgctgaaggcgcgcgacgccacgaaacgggtactggagggctat
ctcgcgctcgcggtcgaagccgcggaccggatgccgatccatttcttcgggctctaccgg
gacgacacggccgtccagcccgcgctgccgccgggcaccgcgcatctgatcgaggatccg
gccgcgtggttcgccgccgagcggcacacctgtgtcgccgccgtctcgctcgccgccgat
ctgggcttcgactcgctggcctggcgtctcgccgccgcgctggcgccgtacttcgaccag
cgcggtcaccaggacgactggatgcacacgcacgccgtcgcgctggccgccgcccgccgg
tccggcgaggtccgcggcgaggcgatcatccagcgcaacctcgggcagatccagctgtac
caggacagctacgccgaggccttggtcgcgttcgagcagtcgcaactgctgttcgacaag
atcggcgacacgcggggagcggcgatcgcgctggccgggctcggcaccgtgctgcggatc
aagggcgaggacaccgtcgcgctggagcactgtcacgcggcgctcgaccagttctcggcg
gcgggcgatccgcacggcgaggccgtcgcgcggatcgcgatcggcgcggtgtggctggcg
cggcgccggttcgccgacgctgaacgctggttcaccgaggcgctggagcagtccgccctg
atcggcgaccggcaccgcgaggcgcacgcgttgaaacggctcgccatgctgcgccagcac
cagggcaacctctccggcgcgcgggagcgggtcgaccgtgccatcgcgatcttcaacgaa
ctcggtgacgaccattgcgtcggctacgcgaaccagaatctcggcgagctgtatctgcac
agcggagacctggcccacgcgcaactgctgctggtcaattcgctgagcgtgcaccggcgc
aacggggaccgccggtccgaggccgaggtgtcgcagttgctcggcgaactgcacgaggcg
ctgagccagcccgagcggtcgcggacgtattcggaacgcgcgctggcgttgtggcgggaa
ctctccgcgcgcccacaggaatccgcgctcgcctcgcgtctgcaggaggcggccgaagcg
tcatacgacgattccgcgagcgcctga
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