Amycolatopsis roodepoortensis: NQK81_16895
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Entry
NQK81_16895 CDS
T08507
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NQK81_16895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aroo02000
]
NQK81_16895
Transporters [BR:
aroo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NQK81_16895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF1195
Motif
Other DBs
NCBI-ProteinID:
UUV35048
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All DBs
Position
complement(3648018..3648902)
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AA seq
294 aa
AA seq
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MTTTLDSPRRRTSAFLYRKPRLRLGILLSAPMLWLGLAYLGALAALFVTAFWSTDVFTGQ
VVTEWSLNNFVTLFSDAVYRTITLRTVGIAALVTVVTAIIAFPMAFYMAKFASPRARRLL
VIAVMTPLWASYLVKAYAWRTMLSGNGVLHWLLNPFGLDTPGYGVLATVITLSYLWLPYM
ILPIYAGLERLPNSLVDASGDLGARPFRTFRSVVLPVTFPAVVAGSIFTFSLSLGDYIAV
KIVGGTSQMLGNVVYDNIGAANNLPFAATVATVPVVIMLAYLAAVRRTGALDNL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaccctcgattcgccgaggcggagaacctccgccttcctgtaccgcaaaccc
aggctgcgactggggatcctgctctccgcgccgatgctgtggctcggcctcgcctacctc
ggcgcgctggccgcgttgttcgtgacggcgttctggagcaccgacgtcttcaccggccag
gtcgtgaccgagtggtcgctgaacaacttcgtcaccctcttcagcgacgcggtgtaccgc
acgattaccctccggacggtcgggatcgccgcgctcgtcacggtggtcaccgcgatcatc
gccttcccgatggcgttctacatggccaaattcgcctcgccgagggcgcggcgcctcctg
gtcatcgccgtcatgacgccgttgtgggcgagctacctggtgaaggcctacgcgtggcgg
accatgttgtccggcaacggggtcctgcactggctgctgaacccgttcggcctcgacacc
cccgggtacggcgtgctcgcgacggtgatcacgctgtcgtatctctggctgccgtacatg
atcctgccgatctacgcgggcctggagcgactgccaaactcactggtggacgcttcgggt
gacctcggcgcccggccgttccggacgttccgctcggtggtgctgccggtgaccttcccg
gccgtcgtcgccggctcgatcttcacgttctcgttgtcgctgggcgactacatcgcggtg
aagatcgtcggcggcacgtcgcagatgctcggcaacgtcgtctacgacaacatcggcgcg
gccaacaacctgccgttcgcggcgaccgtcgcgaccgtacccgtggtgatcatgctcgcc
tacctcgccgccgtgcgccgcacgggcgccttggacaacctgtag
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