Amycolatopsis roodepoortensis: NQK81_18915
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Entry
NQK81_18915 CDS
T08507
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03420
Nucleotide excision repair
aroo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQK81_18915 (pcrA)
03430 Mismatch repair
NQK81_18915 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_18915 (pcrA)
Enzymes [BR:
aroo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQK81_18915 (pcrA)
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQK81_18915 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NQK81_18915 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Terminase_6N
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UUV35424
LinkDB
All DBs
Position
complement(4050113..4052518)
Genome browser
AA seq
801 aa
AA seq
DB search
MNTLFDLPADGPAKSRHSDLLDDLNPAQREAVTHAGSPLLVVAGAGSGKTRVLTRRIAYL
LAERDVHPGQIMAITFTNKAAAEMRERVSDLVGRRANAMWVSTFHSMCVRILRREAKTLE
MSSSFSIYDSDDTKRLITLVARDLDIDPKKYAARTLAVHISNLKNELIDPETAVADAGND
LERRVAEVYVEYQRRLNQANAFDFDDLIMRTVELLQRYPDVAEYYRRRFRHVLVDEYQDT
NHAQYTLVRELVGTEANEAGIEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPNARTV
LLEQNYRSTQTILNAANAVIARNPNRRAKRLWTDSGDGEKIVGYVADNEHDEAAFVAGEI
DALADKGEADYSDVAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDMLAYLR
VLANPEDTVSLRRILNVPKRGIGDRAEAVIATYAERERISFAQALRGAVNGEVPLLNPRS
AKAITGFVELMDELGEVVESGAEVADILEAVLERTGYRTELEESEDPQDASRVENLTELV
TVAREFTEFTTEVAGPEGELPETEPGVPEPGSLPAFLERVSLVADADSVPSPDGGDDGEG
HDAGVVTLMTVHTAKGLEYPVVFGTGWEDGIFPHMRALGDPTELAEERRLAYVAITRARK
RLYVSRSMVRSAWGQPQMNPASRFLDELPADLVDWRRLAPSSSSGGFGSSGGSPRAATTW
GSRGGGSPASRTASTSPFGKGWKDTVALKLDVGDRVSHDKYGLGTVVACDGTGPRATATI
DFGAAGKVRLMLIGSVPMVKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctcttcgatctcccagcggacggtccggccaagtcccggcactcggacctg
ctcgacgacctgaacccggcgcagcgcgaggccgtgacccatgcgggctcgccgctgctc
gtcgtcgcgggcgcgggttccggcaagacccgggtgctgacccggcggatcgcgtacctg
ctggccgaacgggacgtgcaccccggccagatcatggcgatcacgttcaccaacaaggcg
gccgcggagatgcgggagcgcgtgagcgacctcgtcggccgccgcgccaacgccatgtgg
gtgtcgacgttccactccatgtgcgtgcggatcctgcgccgtgaggccaaaacgctggag
atgtcgtcgagtttctccatctacgactcggacgacacgaagcggctcatcaccctcgtc
gcccgggatctcgacatcgatccgaagaagtacgcggcgcgcacgctggccgtgcacatc
tcgaacctcaagaacgagctgatcgatccggagacggcggtcgccgacgcgggcaacgat
ctggaacgccgcgtcgccgaggtctacgtcgagtaccagcggcggctgaaccaggccaac
gcgttcgacttcgacgacctcatcatgcggacggtcgaactcctgcagcggtacccggac
gtcgccgagtactaccggcggcggttccggcacgtgctcgtggacgagtaccaggacacg
aaccacgcgcagtacacgctggtccgcgaactggtcggcaccgaggcgaacgaggccggg
atcgagcccgccgagctctgcgtcgtcggcgacgcggaccagtcgatctacgccttccgc
ggcgcgacgatccgcaacatcgaggaattcgagcgcgacttcccgaacgcgcggaccgtg
ctgctggaacagaactaccgctcgacccagacgatcctgaacgcggcgaacgcggtcatc
gcgcgaaaccccaacaggcgcgcgaagcggctgtggaccgattccggtgacggcgagaag
atcgtcggctacgtcgcggacaacgaacacgacgaagcggcgttcgtcgcgggcgagatc
gacgcgctggcggacaagggcgaagcggactactccgacgtcgcggtcttctaccgcacc
aacaaccaatcccgggtcttcgaagagatcttcatccgcctcggcctgccgtacaaggtc
gtcggcggggtgcggttctacgaacggcgcgaggtccgcgacatgctcgcgtacctgagg
gtgctggcgaacccggaggacacggtcagcctgcgccgtatcctcaacgtccccaaacgg
ggtatcggcgaccgtgccgaagcggtcatcgcgacgtacgccgaacgcgagcgcatctcg
ttcgcacaggcgctgcgcggcgccgtcaatggcgaggtgccgctgctgaacccgcgctcc
gccaaggcgatcaccggtttcgtcgagttgatggacgagctcggcgaggtcgtcgagagc
ggcgcggaggtcgccgacatcctcgaagcggtgctggaacgcacgggctaccgcacggaa
ctcgaggaatccgaagacccgcaggacgcgtcgcgggtggagaacctgacggaactcgtc
accgtcgcgcgggaattcaccgaattcaccaccgaggtcgccggtccggagggcgaactg
ccggagaccgagccgggtgtgccggagccgggctcgctgcccgcgttcctggagcgggtc
tcgctggtggccgacgcggattcggtcccgtcgcccgatggcggcgatgacggcgagggg
cacgacgcgggcgtggtcacgctgatgaccgtgcacaccgcgaagggcctcgaatacccc
gtcgtcttcggaaccggctgggaggacgggatcttcccgcatatgcgcgcgctgggtgac
ccgaccgagctggccgaagagcgccgcctcgcctacgtcgcgatcacgcgggcgaggaag
aggctgtacgtctcccgttcgatggtgcgctccgcctggggccagccgcagatgaacccg
gcctcgcggttcctcgacgagcttcccgccgacctggtcgattggcgcaggctcgcgcct
tcctcgtcctccggtggtttcggttcgtccggcggatcgccgcgggccgcgacgacctgg
gggagccgcggcggtggctcgccggcgtcgaggacggcgagcacgagcccgttcggcaag
ggctggaaggacaccgtcgcgctcaaactggacgtcggcgacagggtcagccacgacaag
tacgggctcgggaccgtcgtcgcctgtgacggcacgggcccgcgggccacggcgacgatc
gacttcggtgccgccggcaaggtccggctgatgctcatcggcagcgtcccgatggtcaaa
ctctag
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