Amycolatopsis roodepoortensis: NQK81_19355
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Entry
NQK81_19355 CDS
T08507
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aroo03016
]
NQK81_19355 (truA)
Enzymes [BR:
aroo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NQK81_19355 (truA)
Transfer RNA biogenesis [BR:
aroo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQK81_19355 (truA)
Prokaryotic type
NQK81_19355 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UUV36239
LinkDB
All DBs
Position
complement(4145728..4146561)
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AA seq
277 aa
AA seq
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MDVSYDGTDFSGWARQPGRRTVQGVLEEALAKQPPGASVPKSVVVAGRTDAGVHAAGQVV
HVDVSPLAGKTRSGRLELDEQGIPDLGRMRHRWNRYLPGDVRVLDARVAPPGFDARFSAV
RRHYLYRVSDAPWGVDPLRRHDTLAWGRPLSVDAMNEASEALLGLQDFAAFCKQREGGTT
IRELQRLVWRRTGPHAVEVAVSADAFCHSMVRSLVGTLLLVGDGRRPLGWPGDVLESRTR
DSAVAPAHGLTLMAVDYPPDAELASRADQTRAMRSPS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
ctggatgtctcctacgacggcacggatttctccggctgggcgcggcagcccgggcggcgc
acggtgcagggggtcctcgaagaggcactcgcgaagcagcctccaggagcttcggtcccg
aagtccgtcgtcgtcgccggccgcacggatgccggtgtgcacgcggcgggccaggtggtc
cacgtcgacgtgtcgcctttagcgggcaaaacgcgatccggccgtctggaactggacgag
cagggcattcctgacctggggcggatgcgtcaccgctggaatcggtacctgccgggcgac
gtgcgggtgctggatgcccgcgtcgcgccgcccgggttcgacgcgcggttttcggccgtg
cggcgtcactacctctaccgcgtttcggacgcgccgtggggcgtggatccgttgcggcgt
cacgacactctggcctggggccgcccgctttcggtcgacgcgatgaacgaggcgtcggag
gctctcctgggcctgcaggacttcgcggccttctgcaagcagcgcgagggcgggacgacc
attcgcgagctgcaacggcttgtctggcggcggaccgggccgcacgcggtcgaggtcgcc
gtctccgccgacgcgttctgccactcgatggtgcgcagtctggtggggacactgctcttg
gtcggggacggccgccgtccactgggctggcccggcgacgtcctggagagccggactcgc
gacagcgcggtggctcccgcacacggcctgacgttgatggcggtcgattacccgccggac
gccgaactcgcctcacgcgccgatcaaacgcgcgccatgcgcagcccctcctga
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