Amycolatopsis roodepoortensis: NQK81_23410
Help
Entry
NQK81_23410 CDS
T08507
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NQK81_23410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aroo02000
]
NQK81_23410
Transporters [BR:
aroo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NQK81_23410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UUV27783
LinkDB
All DBs
Position
complement(4929110..4930651)
Genome browser
AA seq
513 aa
AA seq
DB search
MVFGAAGNPKTFDPLFNDDGETFRIIRQMMDTLIMNKPGTADLEPGLAEKWEGSNEGKTW
TFTLKKGVKFHDGTPFNAEAVCFNFNRMYNMKGAAAQSQMIYYGDVFEGFAKNEGDASGA
PVFKDCQAKDESTAVLNLNKAKGAFPAAFTLPSFSIQSPDALKKYNADAVTQSGDSFSYP
EYALKHPTGTGPFKFESWDQAKGEITLVKATDSPTQTAKLDKLVFKVIPDENARKQALKA
GDIQGYDYPSPADYGLLRNDGEQVLIRPSFNILYLGINQKNNPKLKDLKVRQALAYGLNR
DQFVKSKLPEGAETASQFVPKAIDGYNENVTKYEYNLQKAKDLLKEAGAEGMTLKFYYPT
EVTRPYMPNPADIFTSLSEDMKAMGIKVEPIAKPWNGGYKDDVQKAGKHDVHLLGWTGDY
NDAGNFVGTFFGREKPEFGFENAELFSAISAADAAPAGEAHTKAYQEVNQKIMEYLPAIP
ISYGPPAIVVGPKVKGLVASPLTDERFYTVTVN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcggtgccgccggtaacccgaagacgttcgacccgctcttcaacgacgacggt
gagaccttccgcatcatccgccagatgatggacacgctgatcatgaacaagccggggacc
gcggacctcgagcccggtctggcggagaagtgggaaggcagcaacgaaggcaagacctgg
accttcaccctgaagaagggtgtgaagttccacgacggcaccccgttcaacgccgaagcg
gtctgcttcaacttcaaccgcatgtacaacatgaagggcgccgccgcccagagccagatg
atctactacggcgacgtcttcgagggcttcgccaagaacgagggtgacgcctccggcgcc
ccggtgttcaaggactgccaggccaaggacgagtcgaccgccgtcctgaacctgaacaag
gccaagggcgccttcccggcggccttcacgctgccgtcgttctcgatccaaagcccggac
gcgctgaagaagtacaacgccgacgccgtcacccagagcggtgactcgttctcctacccg
gagtacgcgctgaagcacccgaccggcaccggcccgttcaagttcgagagctgggaccag
gccaagggtgagatcacgctggtcaaggccaccgactcgccgacccagacggccaagctc
gacaagctggtcttcaaggtcatcccggacgagaacgcccgcaagcaggcgctcaaggcc
ggcgacatccagggctacgactacccgtcgcccgcggactacggcctgctgcgcaatgac
ggcgagcaggtgctcatccgcccgtcgttcaacatcctgtacctgggcatcaaccagaag
aacaacccgaagctgaaggacctcaaggtccgccaggcgctggcctacggtctcaaccgc
gaccagttcgtgaagtcgaagctccccgagggcgccgagaccgcgtcgcagttcgtgccg
aaggcgatcgacggctacaacgagaacgtcaccaagtacgaatacaaccttcagaaggcg
aaagacctgctgaaggaagccggcgccgagggcatgacgctgaagttctactacccgacc
gaggtcacccggccgtacatgccgaacccggccgacatcttcacctcgctgtccgaggac
atgaaggccatgggcatcaaggtcgagccgatcgccaagccgtggaacggtggctacaag
gacgacgtccagaaggcgggcaagcacgacgtgcacctgctcggctggaccggtgactac
aacgacgccggtaacttcgtcggcaccttcttcggtcgtgagaagccggagttcggtttc
gaaaacgcggagctgttctcggccatctccgccgcggacgccgcgcccgccggtgaggcg
cacaccaaggcgtaccaggaagtgaaccagaagatcatggaatacctgcccgccatcccg
atctcctacggccccccggcgatcgtcgtcggcccgaaggtgaagggcctggtggccagc
ccgctgaccgacgagcgcttctacaccgtcacggtcaactga
DBGET
integrated database retrieval system
