Amycolatopsis roodepoortensis: NQK81_27060
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Entry
NQK81_27060 CDS
T08507
Name
(GenBank) DUF6531 domain-containing protein
Organism
aroo
Amycolatopsis roodepoortensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
OCRE
T7SS_signal
TEN_YD-shell
PPE
WXG100
DUF6693
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
UUV28455
LinkDB
All DBs
Position
complement(5690859..5695814)
Genome browser
AA seq
1651 aa
AA seq
DB search
MGNPLVAEVKDSTKAYTGSSLLESAFELKSAIESGDWASVALGAVGTALDALSMAMDPFG
AILANGVGWLMEHVGPLKEALDALTGNADEIAANAETWMNIATELGDVGADLAGMVSADL
QSWTGTSADAYRAQAKDTVTLLESAKAGCEGASSGVKTAGEVVAAIRALVRDIIAELIGH
LISWALQVLFTLGIGLTWVVPQVVNAVAKTASKIANLTKKTVKALQALMPLLKRADDLFD
SAAKALKKLQPGKGAPAPKPNKLDEGTTPKSSPDGGGTSPSGAGPGKSDPPPVKSDPPPP
PKNETPDGSTTPSGSPPPPPKDRGAPKPETNNRIKDNETTPGDRVPPKDRGGCGDPIDVA
TGSMMLTQDDVVFAGVLPLTVSRTHLSSYRLGRFFGASWASTVDQRIEVEDDGLHLALAD
GTLLSYPVPVSGPVLPEFGQRLPLSKVDDGYAVTTPDGMLLFAGPGDSLPLRAIVDGDGH
RISVHYDDNGVPRELEHSAGYRLLVESKDGLITALRLPGAETALRSYRYDERRRLVEITD
VAGQPLRFTYDAEGRIVRWEDIDGRWYGYGFDSEGRVVRAQGTGGFLDVDIEYDRENLVT
SVTNSLGHVTRYQLDELHRIVAETDPLGNTTRYEIDRFGKLLSRTDALGRTTRWEMDDDG
NVVTVLQPDGGRALAEYAAPGRWISRTGPDGAVWRREYDERGKLVRATDPTGAVTTYGYD
DAGNVAVVTDALGGVTLIESNSAGLPVAVTDPLGAVTRYTYDEFGRTISVTDPLGGVTRT
KWDGFGEIAEQIDPDGSVWRWNRTTAGSADEAVDARGHAVRTEYSQFDLPTAEIGPDGDR
LSYVYDTELRLVSVTNEHGLVWRYDYDPAGNLVGETDFNGRTTRYGYDAAGQLVSRTNSL
GQTVTIERDALGRVVGRRAGDDVATFTYDGADRMTSARNAHSEVTIAYDALGRIVSEALN
GRAVLSEYDAIGRRVARRTPSGAESFFAYDAASRPVALRTAGRTLRFEYDPAGREVSRRL
EGTPVELRQGWDAADRLTSQTVSTGRGVVQHREYGYLRDGLVSSISDSLSGPRSLRVDRA
GRVVDVQGQGWREGYGYNLAGAITQAGWPGADPAVGPRRYQGTLMTGAGSTSYLHDTEGR
TIARREPGRAWTYQWNSDDRLTGVVTPDGERWLYHYDALGRRIAKQHLDVHGRILEQIDF
TWDGTNLAEEIRGGTAVVWDLEPGTERPITQVERIPGQDARFHAIVTDLVGSPSELLDEA
GDVAWHLHTSLWGKVLSPPGRAYTPLRFPGQYHDPETGLHYNFKRYYDPATGRYLSHDPL
GLEPASDSLAYVGNPTDLIDPLGLAPTRPKTGTCGKGTRGGGGKTKSPGNRVTKPKPAPG
PKKPRRPPQSYLDGTHGAKKREQNRLTAKYDNELKGDGRDKVSGDSHESEHPVPYEAIGR
GSGGARGSSHEQKDLENHAWAYQEAKPAHASHIGTGNKGDQDLTEGSAKPSGFKNSQDYR
DSERNALEGGDANTAIQLNQLDYAFRDGFKNTDGTLDGKIADDSYHKMIDDAHASGKGLT
YSTGPGTTATTPPLSSHDVKELHMARDTIRDGDWPEEMKRQNRETYEQEVDRIHDNYPEP
SAADRAKYQTGEGGWGDLDYGKKDPNAMDVD
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaacccgcttgtcgccgaggtaaaggactcgacgaaggcgtacaccggctcgtca
ctgctggagtcggcgttcgaactgaagtcggccatcgaaagcggcgactgggcctcggtg
gcgctgggcgcggtcgggaccgcgctcgacgcgctgtcgatggcgatggatcccttcggc
gcgatcctcgcgaacggtgtcggctggctgatggagcacgtcggcccgctcaaggaggcg
ctcgacgcgctcaccggcaacgccgacgagatcgccgcgaacgccgagacctggatgaac
atcgcgaccgaactcggcgacgtcggcgcggatctggccgggatggtctccgccgatctg
cagagctggacgggaacctcggccgacgcttaccgcgcgcaggccaaggacacggtcacg
ctgctggagtcggcgaaggccggttgcgagggcgcctccagcggagtgaagacggcgggc
gaggtcgtcgccgccatccgcgcgctggtgcgtgacatcatcgccgagctgatcggacat
ctgatcagctgggcgctccaggtgttgttcaccctcgggatcgggctgacctgggtggtc
ccgcaggtggtcaacgcggtggcgaagaccgcgagcaagatcgcgaacctgacgaagaag
accgtcaaggcgctccaggcgctgatgccgctgctgaagcgagcggacgacctgttcgac
agcgcggcgaaggcactgaaaaagctccagccgggcaagggcgcgcccgcgccgaagccg
aacaagctggacgagggcacgacgcccaagagcagccccgacggcgggggtacttcgccg
tccggcgcggggcccggcaagagcgatccgccgccggtgaagtcggatccacctccgccg
ccgaagaacgagaccccggacggatcgaccacgccgtccggctcgccgcctccgccgccc
aaggaccgcggcgccccgaaacccgagacgaacaaccggatcaaggacaacgaaaccacc
ccgggggaccgcgtcccgcccaaggaccgcggcggctgcggcgacccgatcgacgtcgcg
accggctcgatgatgcttacgcaggacgacgtcgtgttcgccggcgtcctcccgctgacc
gtgtcgcggacgcatctctcgtcgtaccggctcggccggttcttcggcgcttcgtgggcg
tccactgtggaccagcggatcgaggtcgaggacgacggcctgcacctcgcgctcgccgac
gggacgcttttgtcctatccggtcccggtttccggccccgtcctcccggaattcgggcag
cgactcccgctgtccaaagtggacgacggctacgcggtgaccactcccgacgggatgctg
ctcttcgccggccctggcgattcccttcccctgcgcgcgatcgtggacggcgacggccac
cggatctcggtgcactacgacgacaacggcgtcccccgcgagctggagcattccgcgggc
taccgcctgctcgtcgagtcgaaggacgggctcatcaccgcccttcggcttcctggagcg
gaaaccgcgctgcggagctatcggtacgacgagcggcgccgtctggtggaaatcaccgac
gtcgccgggcagcccctgcggttcacctatgacgccgaaggccggatcgtgcgctgggag
gacatcgacgggcgctggtacggatacggcttcgactccgaaggccgcgtcgtgcgggca
cagggcaccggcggcttcctcgacgtcgatatcgagtacgaccgcgaaaacctggtcacc
tcggtcacgaactcgctcgggcacgtcacccggtatcagctcgacgaactgcaccggatc
gtcgcggagaccgacccgctgggcaacaccacgcggtacgagatcgaccgcttcggcaag
ctgctcagccgcaccgacgccttgggccgcaccacgcggtgggaaatggacgacgacggg
aacgtcgtcaccgtgctgcagcccgacggcggccgcgcgctcgccgagtacgccgctccg
ggccgctggatcagccggaccgggccggacggcgccgtctggcgccgcgagtacgacgag
cggggaaagctcgtgcgggccacggatccgaccggcgccgtcaccacctacggctacgac
gacgcgggcaacgtcgcggtcgtgaccgacgcgctcggcggcgtcaccctgatcgagtcg
aactccgcgggcctgccggtcgccgtcaccgacccgctcggcgcggtcacgcggtacacc
tacgacgagttcgggcggaccatctcggtcaccgacccgctcggcggtgtcacccggacg
aagtgggacggcttcggcgagatcgccgagcagatcgacccggacggctcggtgtggcgc
tggaaccgcaccacggcgggttcggccgacgaagccgtggacgcccgcgggcacgcggtg
cgcaccgagtactcgcagttcgacctgcccaccgccgaaatcggcccggacggcgatcga
ctgtcctatgtgtacgacaccgagctgcggctggtttcggtcaccaacgaacacggtctc
gtctggcgctacgactacgaccccgccggaaacctggtgggcgagaccgatttcaacggc
cgcaccacccgctacggctacgacgccgcggggcaactggtgtcgcgcaccaacagtctc
ggccagacggtcaccatcgaacgcgacgcgctcggccgcgtcgtcggccgccgcgcgggc
gacgacgtcgcgacgttcacctacgacggcgccgaccggatgacctcggcgcgcaacgcg
cattccgaagtcaccatcgcctacgacgcgctgggccggatcgtctcggaagcgctcaac
ggccgtgccgtcctctcggagtacgacgccatcggccgtcgcgtcgcgcggcgcacgccg
tcgggcgccgagtcgttcttcgcctacgacgcggcgagccgccccgtcgcgctgcgaacg
gccgggcgcaccctgcgtttcgagtacgacccggcgggccgggaagtgtcgcggcggctc
gaaggcacgccggtcgagctgcgccagggctgggacgccgccgaccggctgacctcccag
accgtgtccaccggccggggtgtcgtgcagcaccgcgagtacggctacctgcgggacggg
ctcgtttcgtcgatctcggattcgctgtccgggccgcgttcgctgcgggtcgaccgggcc
ggccgcgtggtcgacgtccagggacagggctggcgcgagggctacggctacaacctcgcg
ggcgcgatcacgcaggcgggctggccgggcgcggatccggccgtcggaccgcggcgctac
cagggcaccctgatgaccggcgccggatcgacgtcgtacctgcacgacaccgaaggccgc
acgatcgcgcgccgggaacccggacgcgcctggacttaccagtggaactcagacgaccgg
ctcaccggcgtcgtcacccccgacggtgagcgctggctttaccactacgacgcgctcgga
cggcggatcgccaagcagcacctcgacgtccacggccggatcctcgaacagatcgacttc
acctgggacggcacgaacctcgccgaggagatccgcggcgggaccgccgtcgtctgggac
ctggagccgggcacggaacgaccgatcacgcaggtcgaacggatccccggacaggacgcc
cggttccacgccatcgtcaccgatctcgtcggatcaccgagcgaactgctcgacgaggcg
ggcgacgtcgcctggcatctgcacacgtcgttgtggggcaaggtgctttcgccgccgggg
cgggcgtacacgccgctgcgcttccccggccagtaccacgacccggaaaccgggctgcac
tacaacttcaagcgctactacgacccggccaccgggcggtacctctcgcacgacccgctc
ggcctcgaaccggcgtcggactcgctggcctacgtcggcaacccgacggacctgatcgac
ccgctcggcctggcgccgacgcgaccgaagacgggcacctgcggcaaggggacccgcggg
ggcggcggcaagacgaaatcgccgggcaaccgggtcaccaagccgaagccggcaccgggg
ccgaagaagccgcggcgcccgccgcagagctacctcgacggcacgcacggcgcgaagaag
cgtgagcagaaccggctcacggcgaagtacgacaacgaactcaagggcgacggccgggac
aaggtctccggagattcccacgaatccgagcacccggtcccctacgaggcgatcggccgt
ggcagtggtggcgcacggggttcgagtcacgagcaaaaggacctggagaaccacgcttgg
gcgtatcaggaggccaaacccgcgcacgcgtcgcatatcggtaccggtaacaagggcgac
caggacctgaccgaaggttcggcgaagccgagcggcttcaagaacagtcaggactaccgc
gactccgagcgcaacgcgctggaaggcggcgacgcgaacaccgcgatccagctcaaccag
ctcgactacgcgttccgggacgggttcaagaacaccgacggcaccctcgacggcaagatc
gcggacgactcgtaccacaagatgatcgacgacgcgcatgccagcggtaagggcctcacc
tactcgaccggtcccggtacgaccgcgaccacgccgccgctgtccagccacgacgtcaag
gaactgcacatggcccgggacaccatccgggacggcgactggcccgaggagatgaagcgg
cagaaccgcgagacctacgagcaggaagtcgatcggatccacgacaactacccggaaccg
agcgcggccgaccgggcgaagtaccagaccggcgagggcggctggggcgacctggattac
ggcaagaaggacccgaacgcgatggacgtcgactga
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integrated database retrieval system
