Amycolatopsis roodepoortensis: NQK81_29570
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Entry
NQK81_29570 CDS
T08507
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_29570
Enzymes [BR:
aroo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NQK81_29570
DNA repair and recombination proteins [BR:
aroo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NQK81_29570
Prokaryotic type
NQK81_29570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UUV28913
LinkDB
All DBs
Position
6180754..6182103
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AA seq
449 aa
AA seq
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MTREAPVVLWFRRDLRLGDHAALLEASKHSKHVLALYVLDDALLKPSGAPRVAFLHGCLK
ALDDQLGGRLMLVKGDPATEVVKAAREVGAATVHVSADTGPYGRRRDDEVKKALAEHDIA
WVETGSSYAITPGRITKPDGDPYRVFTPFYRAWVRHGWPRPADTGKSIVDWVEPPRSVEL
PKSPSLKGMELPEPGERAALERWHEFLDDGLETYDEDRDRPDRPGTTRLSPYLRWGCVHP
RTLLADLAGNEGSGAKALRGEFAWREFHADVLWHRPETARKNYDSRFDAMEYESDDDAFR
RWCEGRTGFPIVDAGMRQLLAEGWMHNRVRMIVASFLVKDLHLPWWLGARHFMRHLVDGD
LASNQLNWQWVAGSGTDAAPYFRIFNPTTQGEKFDPSGDYVRRYVPELRSVQGKAVHKPV
DVPGYPAPMVDHAHERQVALERYGAIKGS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagagaagccccggtagtgctgtggttccgccgcgacctccgcctcggcgaccac
gccgccctgctggaggcttcgaagcacagcaagcacgttctcgcgctgtacgtcctcgac
gacgcgctcctcaaaccctccggtgccccgcgcgtcgcgttcctgcacggctgtctgaag
gcgctggacgatcagctcggcggacggctgatgctcgtcaagggcgacccggccacggag
gtcgtcaaggccgctcgcgaggtcggcgccgcgaccgtgcacgtcagcgccgacaccggc
ccgtacggccgccgccgcgacgacgaggtcaagaaggcgttggcggagcacgacatcgcc
tgggtcgagacaggctcctcgtacgcgatcacccccggccgcatcaccaagccggacggc
gacccctatcgcgtcttcaccccgttctaccgtgcgtgggtgcgccacggctggccgcgc
cccgccgacaccgggaagtccattgtggactgggtcgagccgccgcgttcggtcgagctc
ccgaagtccccgtcgctcaagggaatggagctgccggagcccggtgagcgggcggcgctc
gaacgctggcacgagttcctggacgacgggctcgaaacctacgacgaagatcgtgaccgg
ccggatcgtcccggcacgacaaggctttcgccgtatctgcgctggggttgcgtccacccg
cgcaccctgctggccgacctcgccgggaacgagggatccggcgccaaggcgctgcgcggc
gagttcgcctggcgcgagttccacgccgacgtcctgtggcaccggcccgaaaccgcgcgg
aagaactacgattcccggttcgacgccatggaatacgagagcgacgacgacgctttccgg
cggtggtgcgagggacgcaccgggttcccgatcgtcgacgccgggatgcggcagctgctc
gccgagggctggatgcacaaccgcgtccggatgatcgtggcgagtttcctggtcaaggac
ctgcatctgccgtggtggctcggcgcgcggcatttcatgagacatctggtcgacggcgat
ctcgcgtcgaaccagctgaactggcagtgggtcgcgggcagcggcaccgacgccgcgccg
tacttccggatcttcaacccgaccacgcagggggagaagttcgacccttccggcgactac
gtccgccgttacgtccccgaactccggtctgtgcaaggcaaagccgtgcacaagcccgtc
gacgtgcccggctaccccgcgcccatggtcgaccacgcccacgaacgtcaggtcgccctc
gagcgctacggcgcgatcaaaggatcctga
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