Amycolatopsis roodepoortensis: NQK81_31655
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Entry
NQK81_31655 CDS
T08507
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_31655
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQK81_31655
Archaeal homologous recombinant proteins
NQK81_31655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UUV29307
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All DBs
Position
6602193..6603344
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AA seq
383 aa
AA seq
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MKLLHTSDWHIGRTFHGADLLAEQETVLGHLADLVAAESVDVVLVSGDIYDRAVPSAEAV
RVATTALGRIRQAGAALVMTPGNHDSAPRLGAFAEFAAAGGLHLRATIDGLAEPVLLSDE
HGEVALYGIPYLEPEPARHALGVPESRGHTGVLTEAMRRIREDLAGRPSGTRSVVLAHAF
VTGGEPTDSERTIAVGGVEQVPGSVFDGVDYVALGHLHGPQTLAEHLRYSGSPLAYSFSE
TRQRKSVWLVELGADGLAEVRRHELPVPRHLAMLRGELADLLSDPEHDGLTEHFLSFTVT
DRVRPIDAMRKLRERFPYAVHMDWQPEGGHDGAVLKYAEAVRGRSDVEITRSFLEDCRGS
APSESEERLVLAALGAAGREREV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcctgcacacgtccgactggcatatcggccgtaccttccacggcgccgatctg
ctcgccgagcaggaaaccgtgctcggccacctcgccgacctcgtggccgccgaatcggtc
gacgtcgtgctcgtgtccggggacatctacgaccgcgcggtgccctcggcggaggccgtc
cgcgtggccaccaccgcgctgggcaggatccgccaggccggggcggcactggtgatgaca
ccgggcaaccacgactccgcgccgcggctgggcgcgttcgccgagttcgccgcggcgggc
gggctgcatctgcgcgccacgatcgacgggctcgccgagccggtgctgctgtccgacgag
cacggcgaggtcgccctctacgggatcccgtacctcgaaccggagcccgcgcgacacgcc
ctcggcgtgcccgagtcccgcggtcacaccggcgtgctcaccgaagcgatgcggcggatc
cgtgaggatctcgccggacggccctccggaacgcggtcggtggtgctcgcgcacgccttc
gtcaccggcggcgagccgaccgactccgagcggaccatcgcggtcggcggcgtcgagcag
gtgccgggttcggtgttcgacggcgtcgactacgtcgcgctcggccacctgcacggcccg
cagaccctcgccgagcacctgcgctattcgggcagtccgctggcgtactcgttttccgag
acgcgccaacggaaatcggtctggctggtggagctcggcgccgacgggctcgccgaggtc
cggcggcatgaactgccggtgccgcgccacctcgcgatgctgcgcggcgagctggcggat
ctcctttcggatccggagcacgacggcctcaccgaacacttcctttccttcacggtcacc
gaccgggtccgcccgatcgacgccatgcgcaaactgcgtgagcggtttccgtacgcggtg
cacatggactggcagccggaaggcgggcacgacggtgccgtgctgaagtacgccgaagcc
gtccgcgggcgatccgacgtcgagatcacccggagtttcctggaggactgccgcgggtcc
gcgccgtcggagagcgaggagcggctggtgctggcggcgctgggcgcggcgggcagggag
cgcgaggtatga
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