Amycolatopsis roodepoortensis: NQK81_33800
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Entry
NQK81_33800 CDS
T08507
Name
(GenBank) TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
aroo01504
]
NQK81_33800
Antimicrobial resistance genes [BR:
aroo01504
]
Gene variants
Tetracycline resistance genes
Others
NQK81_33800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EF-G_D2
EFG_III
GTP_EFTU_D2
MMR_HSR1
FeoB_N
Ribosomal_L9_C
DUF1949
SRPRB
BAT
ORF_2_N
Motif
Other DBs
NCBI-ProteinID:
UUV29704
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Position
complement(7054048..7055931)
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AA seq
627 aa
AA seq
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MEYLNLGILAHVDAGKTSLTERLLHHTGAIRTLGRVDAGNTHTDTMELERRRGITIRSAV
VAFRVGDLRVNLIDTPGHPDFIAEVERALRVLDGVVLVVSAVEGVQAQTRVLMRALTRLR
IPVLIFVNKVDRAGARHEGLLTDLAERLGVACVPMSEVDGIGTGNAKVRPSSLPAATAER
LAEHSDAFLAAYLEDTVTAGDCRAELVRQTRLGLVSPVFFGSARSGAGIAELTSGIREFL
AGAAKPVPDDRLRATVFKIERGRAHEKIAYVRVFSGEIGARDHVRFHRRGPGGTVTKEAK
VSAVHVFELGDETVEGRARAGRIAKVTGLKEIRIGDLVGVPDGEDGAARFPPPALETVVG
PATPAVFAALQELAEQDPLITVRQDDETRRISVRLYGEVQKEIIAETLAAQHGLDVTFSL
TRPVRVERPVGTGHSVWFITEKRNPYFATLGLRVGPGAPGSGLTFGLEVELGSLPLAFHK
AIEETVDATLRNGPSGREVIDCVVTVTHTGYFSPVSAAGDFRKITPFVLAEALREAGTEV
LEPASRIEVELPADTVTATLSRLVEHGGTVTGSVTQGDRAELTGVLPTGEVARFEQRLPG
LTRGEGLMSTEPAGHRPRVSPNRSMPG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagtacctgaacctgggcatcctcgcccatgtcgacgccggtaagacgagcctgacg
gagcgcctgctccatcacaccggtgccatccgcaccctcggccgcgtcgacgccgggaac
acccacaccgacacgatggaactggaacgccgccgcgggatcacgatccgctcggccgtc
gtggccttccgcgtcggtgacctgcgcgtcaacctgatcgacacgcccggccacccggac
ttcatcgccgaggtcgaacgcgcgctgcgagtgctcgacggtgtcgttctggtcgtttcc
gcagtcgagggagtgcaggcacagacccgtgtgctcatgcgcgcgctcacccgcctgcgg
atccccgtgctgatcttcgtcaacaaggtcgaccgggcgggcgcccgccacgagggactc
ctcaccgacctcgccgaacgtctcggtgtcgcctgcgtgccgatgtccgaagtcgacggc
atcggcacgggtaacgcgaaagtccggccgtcctccctgccggcggcgacggccgaacgg
ctggccgagcacagcgatgccttcctcgccgcgtatctcgaagacacggtgacggccggg
gactgccgggccgaactcgtccggcagacccggctcggtctcgtctcccccgtcttcttc
ggctccgcgcgcagtggcgcgggcatcgccgaactgacctccggtatccgcgaattcctt
gccggagcggcgaaaccggtgccggacgaccggttgcgtgccaccgtgttcaagatcgaa
cgcggccgcgcgcacgagaagatcgcctacgtccgggtgttctccggcgagatcggcgcg
cgggaccacgtccgattccatcggcggggacctggcgggacggtcacgaaggaggcgaag
gtcagcgcggtgcacgtcttcgaactcggcgacgagaccgtcgagggccgggcgcgggcc
ggtcggatcgccaaggtcaccgggctcaaggagatccggatcggcgacctcgtcggcgtt
cccgacggcgaggacggcgccgcacggtttccgccgcccgccttggaaaccgtggtcggt
ccagccacgcccgcggtgttcgcggccttgcaggagctggcggaacaggatccgctgatc
accgtccggcaggacgacgagacccgccggatctcggtgcggctctacggcgaggtgcag
aaggagatcatcgcggagacgctcgccgctcagcacggcctcgacgtcacgttcagcctc
acccggccggtccgcgtcgagcggccggtcggcaccgggcattcggtgtggttcatcacg
gagaaacggaacccgtacttcgcgacgctcgggcttcgagtcggccccggcgcacccggt
tccggcctgaccttcggcctcgaggtcgaactcggctccctcccgctcgccttccacaag
gccatcgaggagaccgtcgacgcgacactgcgaaacggcccgtccggccgggaggtcatc
gactgtgtggtgaccgtcacccacaccggctacttcagcccggtcagcgcggcgggtgac
tttcgcaagatcaccccgttcgtgctggcagaggccctccgggaggcgggaacggaggta
ctcgaaccggccagccggatcgaggtggaactgcccgccgacacggtgaccgcgacgctc
tcccggctcgtcgaacacggcggcaccgtcaccggttcggtgacacagggcgaccgggcc
gagctgacgggtgtgctgcccacgggcgaggtcgcccggttcgaacagcggttgcccggg
ctcacccgcggcgagggcctgatgagcaccgaaccggcgggtcaccggccacgggttagc
ccgaatcggtcaatgcccggctag
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