Amycolatopsis roodepoortensis: NQK81_33900
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Entry
NQK81_33900 CDS
T08507
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NQK81_33900 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroo03019
]
NQK81_33900 (orn)
03009 Ribosome biogenesis [BR:
aroo03009
]
NQK81_33900 (orn)
Messenger RNA biogenesis [BR:
aroo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQK81_33900 (orn)
Ribosome biogenesis [BR:
aroo03009
]
Eukaryotic type
Pre-60S particles
RNases
NQK81_33900 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UUV29722
LinkDB
All DBs
Position
complement(7076137..7076745)
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AA seq
202 aa
AA seq
DB search
MNDRLVWIDCEMTGLDLGKDALIEIAALVTDAELNVLGEGVDIVIHADDEALDGMPEVVR
EMHARSGLTEEVRRSTVTMEEAEQRVLEYVRAHVPEANVAPLAGNSIATDRGFITRDMPL
LDAHLHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIKESIGELDYYRRAAFVP
QPGPTTEQAKAAAAEVQERHQG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaccgcctagtctggatcgactgcgagatgacggggctcgacctcggcaaggac
gcgttgatcgaaatagccgcgctggtgaccgacgccgagctcaacgtcctcggcgaaggc
gtcgacatcgtcatccacgccgacgacgaagccctcgacggcatgccggaggtcgtccgc
gaaatgcacgcccgctccggcctcaccgaagaggtccggcgctccaccgtgaccatggaa
gaggccgagcagcgcgtgctcgagtacgtccgcgcgcacgttcccgaggccaacgtcgcc
ccgctcgccggcaactccatcgccaccgaccgcggcttcatcacccgcgacatgccgttg
ctcgacgcgcacctgcactaccgcatggtcgacgtctcgtcggtgaaggaactcgtccgg
cgctggtacccgcggatctactacgccaagcccgagaaaggcctcgcgcaccgcgcgctc
gccgacatcaaggaatccatcggggagctcgactactaccgtcgcgccgccttcgtcccg
cagcccggcccgaccaccgaacaggccaaggcggcggccgctgaagtgcaggaacgccac
caagggtaa
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