Amycolatopsis roodepoortensis: NQK81_33905
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Entry
NQK81_33905 CDS
T08507
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_33905
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NQK81_33905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA
TrwB_AAD_bind
AAA_16
ResIII
AAA_30
FtsK_SpoIIIE
CbiA
Zeta_toxin
T2SSE
AAA_19
Isochorismatase
PhoQ_Sensor
Zot
AAA_7
AAA_6
Motif
Other DBs
NCBI-ProteinID:
UUV29723
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Position
7076858..7078384
Genome browser
AA seq
508 aa
AA seq
DB search
MAEQGPAQEIAQGYVSEGAAVELGAVVIDGKADAGAAVRLPLATLNRHGLVAGATGTGKT
KTLQLIAEQLSAAGVPVVLADVKGDLSGLAAQGESNDKIAKRAEELGDSWEPAAFPVQFL
SLGTGGKGSPIRATITSFGPILLSKVLGLNETQESTLGLIFHWADQRGLALLDTKDLRSV
ITHLTSDEGKEDLKGIGGVSAATAGVILRALSNLEAQGGEDFFGEPELDVHDLMREVDGK
AMVTLLELDNLQSKPALFSTFLMWLLAELFEELPEEGDLDKPKLVFFFDEAHLLFNDASK
AFLERIEQTVKLIRSKGVGVFFCTQLPTDIPNNVLSQLGARVQHALRAFTPEDQAALTKT
VKTYPKTKHYELDSALTSLGIGEAIVTVLSERGAPTPVAWTRLRAPRSKMGSIGAEAISA
ATTSSDLHAKYSETIDRESAYEKLAAKVAAPPAGEAPPPEAPVPKPEKEGPGMVEQAMKN
PAVKSFLRSAASALGREITRGLFGNRRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaacagggtccagcccaggagatcgcgcagggatacgtgagcgagggggcggcg
gtcgagctcggcgccgtcgtgatcgacggcaaggccgacgccggcgcggcggtccgcctg
ccgctcgcgacgctgaaccggcacgggctggtcgcgggcgcgaccggtaccggcaagacg
aagaccctgcagctgatcgccgaacagctgtcggccgcgggggtgcccgtggtgctggcg
gatgtgaagggcgacctgtccgggctcgccgcgcagggcgagagcaacgacaagatcgcc
aaacgcgcggaagaactgggtgactcttgggagcccgccgcgttccccgtgcagttcctg
tcgctgggcacgggcggcaaggggtcgccgatccgcgcgacgatcaccagtttcggcccg
atcctgctgtcgaaggtgctggggctcaacgaaacccaggagtcgacgctcggcctgatc
ttccactgggccgatcagcgcgggctggcgctgctggacacgaaggacctccgctcggtc
atcacgcacctgacgagtgacgaaggcaaggaggacctcaagggcatcggcggcgtctcg
gccgcgacggcaggcgtgatcctccgcgcgttgtccaatctggaggctcagggcggcgag
gacttcttcggcgagcccgagctggacgtccacgatctgatgcgcgaggtcgacggcaag
gcgatggtgaccttgctggagctggacaacctccagtcgaagccggcgctgttctcgacc
ttcctcatgtggctcctggccgagttgttcgaggagctgcccgaagagggagacctcgac
aagccgaagctggtgttcttcttcgacgaggcgcacctgctgttcaacgacgcgtcgaag
gcgttcctggagcgcatcgaacagaccgtgaagctgatccggtcgaagggtgtcggcgtc
ttcttctgcacacagctcccgacggacatcccgaacaacgtcctgtcccagctgggtgcg
cgggtgcagcacgcgttgcgcgcgttcacgcccgaggatcaggcggcgctgacgaagacg
gtgaagacgtatccgaagacgaagcactacgagctggactcggcgctgacgtcgctcggt
atcggcgaagcgatcgtcaccgtcctttccgagcggggcgcgccgacaccggtcgcgtgg
acacgccttcgcgcgccgcgttcgaagatgggttccatcggcgccgaagccatttccgcg
gcgacgacgtcttcggacctgcacgcgaagtactccgagacgatcgaccgtgagtcggct
tacgagaagctcgccgcgaaggtggctgcgccgccggctggtgaggcgccgccgcccgag
gctcccgttccgaagccggagaaggaaggccccggcatggtcgagcaggcgatgaagaac
ccggcggtcaagtcgttcctccgctcggcggcgagcgcgctggggagggaaatcacccgc
ggcctgttcgggaaccggaggcggtga
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