Amycolatopsis roodepoortensis: NQK81_35750
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Entry
NQK81_35750 CDS
T08507
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroo03021
]
NQK81_35750
Transcription machinery [BR:
aroo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NQK81_35750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
HTH_3
Sigma70_ECF
HTH_Crp_2
KORA
HTH_31
HTH_24
MarR_2
DUF7343
HTH_Tnp_4
GerE
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
UUV36406
LinkDB
All DBs
Position
7422471..7423256
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AA seq
261 aa
AA seq
DB search
MPAPRARRTRRKDDYSHCRPLFDEMAALPAGHPERGRLRERLILELLPIAEHIAVRFSGR
GQPREDLIQVARIGLMKAVDRFDPGQGGEFLAYAVPTVMGEVRRFFRDTGWAVHVPRGMQ
ELRTRLSRATTELTQTLGRAPTPTELAGHLDVHVDTVREGLLAANSYQTSSLDRPVNDGE
GSLPLSDVVGELDSRFEHIEDRHTVVPLLEKLPERERAIVTMRFFEGMTQSQIAERIGIS
QMHVSRLLTKILQDLRGRLSG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcctcgcgcccgccgtacgcggcgcaaggacgattactcccattgccgtccc
cttttcgacgagatggcggccctgcccgccggtcacccggaacgggggcgtcttcgggaa
cgcctgatcctcgaactgctgccgatcgccgagcacatcgccgtccggttcagtggacga
ggacagccgcgggaagacctgatccaagtggcgcggatcggcctcatgaaggccgtggac
cggttcgatccggggcagggcggggaattcctcgcgtacgcggtgccgacggtgatgggc
gaggtgcggcggttcttccgtgacaccggctgggcggtccacgtcccgcgcgggatgcag
gaactgcgcacccggctttcgcgggcgaccacggaactgacccagaccctcggccgcgcg
ccgacccccaccgaactcgccgggcatctcgacgtgcacgtcgacaccgtccgcgaaggc
ctgctcgccgcgaacagctaccagacgtcgtccctcgaccggccggtcaacgacggcgag
ggttcgcttccgctgtccgatgtggtgggagaactggattcccgcttcgagcacatcgag
gatcggcacaccgtggtcccgctgctcgaaaagctgccggagcgggagcgggcgatcgtc
acgatgcggttcttcgaggggatgacccagtcgcagatcgccgaacgcatcgggatctcc
cagatgcacgtttcccggctgctcacgaagatcctgcaggatctgcgcggcaggctcagc
ggctga
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