Amycolatopsis roodepoortensis: NQK81_35945
Help
Entry
NQK81_35945 CDS
T08507
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroo03032
]
NQK81_35945
03036 Chromosome and associated proteins [BR:
aroo03036
]
NQK81_35945
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_35945
DNA replication proteins [BR:
aroo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NQK81_35945
Chromosome and associated proteins [BR:
aroo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NQK81_35945
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NQK81_35945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
UUV30113
LinkDB
All DBs
Position
7466319..7466984
Genome browser
AA seq
221 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGSKKLPKATAVKRATAGTSTRATTTRATTT
RTAASRPAATRSTTTRTRAAATTTRAAAKPAAKATATKAAAKTTATKAAPKTAAKATTRA
TTAKKATATKAAAKPAAKATAAKAPAKKAPAKRTSAAAKKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgcctgggcgacaagaaggtc
gcgtcggaggccgtcgatggccttgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgcccgcaccgcg
cggaacccgcgcaccggtgagaccgttcgcgtcaagaagaccaacgtgcccgcgttccgc
gccggcacgaccttcaaggacgtcatcagtggttcgaagaagctgccgaaggccaccgct
gtgaagcgcgcgaccgccggcacctccacccgcgccaccaccacccgcgcgacgacgacc
cggacggccgccagccgcccggccgcgacgcgttccacgaccacgcggacccgcgccgcc
gccacgacgacgcgtgccgccgcgaagccggccgccaaggcgaccgcgaccaaggcggcg
gccaagacgaccgccaccaaggccgcgccgaagaccgccgccaaggccacgactcgcgcc
accacggccaagaaggcgaccgccaccaaggccgccgcgaagccggccgccaaggcgacc
gccgccaaggctcccgcgaagaaggctccggccaagcggacttcggctgccgcgaagaag
aagtaa
DBGET
integrated database retrieval system
