Amycolatopsis roodepoortensis: NQK81_36065
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Entry
NQK81_36065 CDS
T08507
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQK81_36065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_36065
Enzymes [BR:
aroo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NQK81_36065
DNA repair and recombination proteins [BR:
aroo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQK81_36065
Prokaryotic type
NQK81_36065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UUV30137
LinkDB
All DBs
Position
7488577..7489254
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AA seq
225 aa
AA seq
DB search
MTARPLQDIVEAGWAKALEPVAPQVAAMGEFLRAEIAAGRTYLPAGEHVLRAFQQPFHDV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPKSLINIYKEYCEDLGHPLPSNGDLTPWAD
QGVLLLNRSLTVQPGKSNSHQGKGWEAVTEQAIKALAARDEPMVAILWGRNARNLKPMLG
KVPCIESAHPSPLSAHAGFFGSRPFSRANQLLEQQGAGPVDWKLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacgaccgctgcaggacatcgtcgaagcaggctgggcgaaggccctcgaaccg
gtggcgccgcaggtcgccgcgatgggggagttcctccgcgcggagatcgccgcgggccgg
acctatctcccggcgggtgaacacgtgctgcgggcgttccagcagccgttccacgacgtg
cgggtgctgatcgtcggccaggacccgtacccgacgcccgggcacgccgtcgggctgagc
ttctcggtggcgccggacgtccggccgatcccgaagagcctgatcaacatctacaaggag
tactgcgaggacctcgggcacccgctgccgtcgaacggggacctgacgccgtgggccgac
caaggggtcctgctgctcaacaggtcgctgacggtgcagccggggaagtcgaactcgcac
cagggcaagggctgggaagcggtcaccgagcaggccatcaaggccctcgccgcccgggac
gagccgatggtggcgatcctgtggggccgcaacgcgcggaaccttaagccgatgctgggg
aaggtgccgtgcatcgagtcggcgcacccgagcccgctctcggcgcacgccggcttcttc
gggtcgcggcccttcagccgggcgaaccagctgctggagcagcagggcgccggtcccgtg
gactggaagctcccctga
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