Amycolatopsis roodepoortensis: NQK81_36855
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Entry
NQK81_36855 CDS
T08507
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aroo03000
]
NQK81_36855
Transcription factors [BR:
aroo03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NQK81_36855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
TrmB
HTH_20
MarR
Dimerisation
HTH_36
HTH_Crp_2
HTH_5
HTH_27
Motif
Other DBs
NCBI-ProteinID:
UUV30289
LinkDB
All DBs
Position
complement(7655822..7656598)
Genome browser
AA seq
258 aa
AA seq
DB search
MAAEKNGRDGGVQSLQRAFELLEHLADTGGEASLSELATLSGLPMPTIHRLIRTLVDLGY
VRQNTNRRYALGARLIRLGENASMQFGSWARPLLAELVDEVGETANLAVLERDEVVYVAQ
VPSKHSMRMFTEVGRRLLPHGTGVGKAMLAHLPSDDVTALLARTGMPSYTEHTFTDQDAL
LRELAKIAQQGYALDEAEQELGVRCVAVAVPGAPVPAAVSVSGPSGRLTMEAVERIAPVV
QRIANSLGSTLSKDGVTV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcggagaagaacgggcgcgacggcggcgtccagtcccttcagcgggccttcgag
ctcctcgagcatctcgcggacaccggcggggaggccagcctttcggagctggcgaccctg
tccgggttgccgatgccgaccatccaccggctgatcaggacgctggtggacctgggttac
gtccggcagaacaccaaccgccggtacgcgctgggcgcccgcctcatccggctgggcgag
aacgccagcatgcagttcggctcgtgggcccgcccgctgctcgcggagctggtcgacgag
gtcggcgagaccgcgaacctcgccgtcctcgagcgcgacgaggtcgtctacgtcgcccag
gtgccctcgaagcactcgatgcggatgttcaccgaggtcgggcggcgtctcctgccgcac
ggcaccggcgtggggaaggcgatgctcgcgcatctgccgtccgacgacgtcacggcgctg
ctcgccaggacgggcatgccctcctacaccgagcacaccttcaccgaccaggacgcgctc
ctgcgcgagctggcgaaaatcgcccagcagggttacgcgctcgacgaagcggagcaggag
ctgggtgtccgttgcgtggccgtcgcggtgccgggcgcgccggtgccggcggccgtctcg
gtgtccgggccgtcgggacggctgacgatggaggccgtcgagcggatcgcgcccgtcgtc
cagcggatcgcgaactcgctcggttcgaccctttcgaaggacggggtcaccgtttga
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