Amycolatopsis roodepoortensis: NQK81_37220
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Entry
NQK81_37220 CDS
T08507
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
aroo
Amycolatopsis roodepoortensis
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroo03009
]
NQK81_37220
Ribosome biogenesis [BR:
aroo03009
]
Prokaryotic type
ribosomal protein modification factors
NQK81_37220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
DUF5633
Motif
Other DBs
NCBI-ProteinID:
UUV30359
LinkDB
All DBs
Position
complement(7723010..7725178)
Genome browser
AA seq
722 aa
AA seq
DB search
MGSEEVRPRLDGIEITDLEPELCFLVTPNGGQFYIAAPTREFRAWASRCDGTSTRAELLA
GMDPDYEEMMEILEADGCLSSGRDTGDDDVAATSILLTGSPALTEPLAEILHSGGYASVE
TVPYFHDLSEVDTENTVVVAAFDHPAYTELIALDALCAGSGVRWLPLRRERGRVIAGPAI
APGGIDFADVVARRRSAAQDPRVVEAFLSAPSDSIPLRPGDARWALTTLAVHLEHWLSGG
RSGLTTGEIELNPADLTEIRRPILPVPDRARPVPATTDPGLLVDDQTGIVTGVGEIPPAP
GMPARLRVCAVDVADMRRVTNWPNDRQAFGTSWHDFDLARQSAIGEAVERYCGSWLAPER
EVCFGSYKQFFRYGVPALDPQRLNLYSATQYRSPGFPFAPLTQDTECSWVEGFSHTTGEP
VWVPAFLFSNERRPEEAYFADPLIAGLASGTTEEHAVTSGLEEVLERDTTMLWWANTPRL
GRLSIPDEIRSLIADATDDYEVTLIHLDNEFDVPVVAAVVLDRVKRWLSIGFATRPDALE
AAKKALAEGFTLQHTCRALDDERELAGMRRDLPHLGNLKPHRADRRYLDSYREDFADVAD
LLCQQQIYLDPRAVKRVAPWLRDLPSRGWDDLPALGERRLKAYQARVEARGFEVISVDLT
TCDVAAAGFHAAHTLVPGLVSNFPAGSPLWGNGRIADAAVALGWRDEPLAEHELNVFPLP
HA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgaagaggtcagaccgcggctcgacggaatcgagatcaccgatctcgaaccg
gagctctgctttctcgtcacgcccaacgggggccagttctacatcgccgcgccgacccgg
gagttccgtgcctgggcgagccgttgcgacggcaccagcacccgtgccgaactgctggcc
ggaatggatccggactacgaggagatgatggagatcctcgaagcggacggctgcctcagc
tccggccgtgacaccggggacgacgacgtcgccgccacctcgatcctgctcaccggctcg
cccgcgctcaccgagccgttggcggaaatcctccacagcggtgggtacgcgagcgtcgag
acggtcccctacttccacgatctgtccgaagtggacacggagaacaccgtcgtggtcgcg
gccttcgatcaccccgcctacaccgaactgatcgcgctggacgcgttgtgcgccggcagc
ggggtgcgctggctgccgttgcgccgcgaacgcggccgggtgatcgccggacccgcgatc
gcgcccggcggcatcgatttcgccgacgtcgtcgcgcggcgccgctccgccgcacaggac
ccgcgagtcgtcgaagcgttcctctcggccccctcggactccatcccgcttcggccgggc
gacgcccgctgggcgctgaccaccctcgccgtccatctcgaacactggctctccggcgga
cgctccggcctgaccaccggcgagatcgaactcaacccggcggacctcaccgagatccgc
cgtccgatcctccccgtacccgaccgggcccggcccgttcccgccacgaccgaccccgga
ctgctggtggacgaccagaccgggatcgtgaccggcgtcggcgagatcccgcccgcgccg
ggaatgcccgcccggctgcgggtctgcgcggtcgatgtcgcggacatgcgccgcgtgacg
aactggcccaacgaccgtcaggccttcggcacgtcttggcacgacttcgacctcgcgcgt
cagtcggccatcggcgaagcggtggagcgctactgcggaagctggctcgctccggagcgc
gaagtgtgcttcggcagctacaagcaattcttccgctacggcgtccccgcactcgacccg
caacggctgaacctctattcggccacgcagtaccggtcgccgggtttcccgttcgcgcca
ctgacccaggacacggaatgttcttgggtggaaggcttctcccacaccaccggcgaaccc
gtctgggttccggccttcctgttctcgaacgaacgacggccggaggaagcgtacttcgcc
gatccgctgatcgccggcctcgcgagcgggaccaccgaggagcacgccgtcacctccggc
ctcgaagaggtcctcgaacgcgacaccaccatgctttggtgggccaacacgccacggctc
ggcaggctctcgatcccggacgagatccggtcgctcatcgccgacgccaccgacgactac
gaggtcacgctcatccacctggacaacgagttcgacgtcccggtggtcgcagcggtggtc
ctcgaccgcgtgaaacgctggctgtcgatcggtttcgcgacccggccggacgcgctcgag
gccgcgaagaaggcgctcgccgaagggttcacgctccagcacacctgccgcgccctcgac
gacgaacgcgaactggcgggcatgcgccgggacctgccgcatctgggcaacctcaaaccg
caccgggccgatcggcgctacctggactcgtaccgcgaggacttcgccgacgtcgcggat
ctcctttgccagcaacagatctatctcgacccacgggccgtgaagcgagtggcgccctgg
ctcagggacctgccgagccgtggctgggacgaccttcccgccctcggggaacggcggctg
aaggcctaccaagcccgcgtcgaagcccggggattcgaggtgatcagcgtagacctgacg
acctgcgacgtcgcggccgccggattccatgccgcgcatacgctggtcccggggctcgtg
tcgaacttccccgccggttctccgttgtggggcaacggaaggatcgccgacgcggcagtg
gcgctcggctggcgcgacgaaccgctcgccgagcacgaactcaacgtcttcccgctcccc
cacgcgtga
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