Amycolatopsis roodepoortensis: NQK81_38115
Help
Entry
NQK81_38115 CDS
T08507
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03030
DNA replication
aroo03430
Mismatch repair
aroo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQK81_38115
03430 Mismatch repair
NQK81_38115
03440 Homologous recombination
NQK81_38115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroo03032
]
NQK81_38115
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_38115
Enzymes [BR:
aroo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQK81_38115
DNA replication proteins [BR:
aroo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQK81_38115
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQK81_38115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
Sulfotransfer_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UUV30526
LinkDB
All DBs
Position
complement(7910641..7912359)
Genome browser
AA seq
572 aa
AA seq
DB search
MDTGRRPGAAQLAFDELGTPLRDITFVVFDLETTGTKPGPDGITEIGAVKIRAGEVVGEF
ATFVNPGMPIPPQIVELTGITGAMVYDAPRIERVLPAFLEFISGAVLVAHNAAFDTGFMR
AACEGHGYHWPKTAVVCTVRLARRVISRDETPSYRLSALAALFGARTTPNHRALADARAT
VDVLHALLERVGNLGVHTLEELLDYLPEVTAAQRRKRSLAEHLPSRPGVYLFRGPSDEVL
YVGTSSDLRRRVRQYFTGSESRGRIREMVALAERVDAVECAHALEAAVRELRLIAAHRPM
YNRRSKNPRHAWWVALTEEAFPRLSVVRMPRDGMLGPFRTQTDARTAADTLAGASGLRTC
TQRISATAPNGTPCVLAELGRCGAPCAGKQTVEAYRPSVLAVSGLIAGTDGRPLRAAADQ
LARLSAAEHYEQAAQHRDQLAGLIRAVGRAHRQSALAGIPELIAAGPDGNGGWELAVIRH
GRLASAGVARRGVPPMPVVEMLVASAETVIPGPGPLFGAIPEEIGILLRWLTRPGVRLVR
TTHPWAEPAAAGGWQEWLDLAASATALERVAG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggacggcggcccggcgcggcgcaactcgccttcgacgagctgggaactcct
ttgcgggacatcactttcgtcgtattcgacctggagaccacggggacgaaacccggtccg
gacgggatcaccgagatcggcgcggtcaagatccgcgccggcgaggtcgtcggcgaattc
gccaccttcgtcaatcctgggatgccgatcccgccgcagatcgtcgagctcaccggtatc
accggcgcgatggtctacgacgctccccgcatcgagcgcgtgctccccgcgttcctcgag
ttcatctccggcgccgtgctcgtcgcgcacaacgccgccttcgacaccggcttcatgcgg
gcggcctgcgaaggccacggctaccactggccgaagacggccgtcgtctgcacggtgcgg
ctcgcccgccgggtcatctcccgcgacgagacgcccagctaccgcctttccgcgctggcc
gcgttgttcggcgcgcgcaccacgccgaaccaccgcgcgctcgcggacgcgcgcgccacc
gtcgacgtcctgcacgccctgctggaacgagtgggcaacctcggcgtccacaccctcgag
gagctgctggactatctgcccgaggtgaccgccgcccagcgccgcaaacgttcgctggcc
gagcatctgccgtcgaggcccggcgtctacctgttccgcggcccgagcgacgaggtcctc
tacgtcgggacgtcgtccgatctgcggcgccgggtgcggcagtacttcaccggttcggaa
agccggggccggatcagggagatggtcgcgctggccgaacgggtcgacgcggtcgaatgc
gcgcacgcgctggaggccgccgtccgggagctgcggctgatcgccgcccaccgcccgatg
tacaaccgccgttccaagaacccacggcacgcctggtgggtcgcgctgaccgaggaggcg
ttcccccgcctgtcggtggtccgcatgccgcgagacgggatgctggggccctttcgcacc
cagaccgacgcccggaccgccgcggacaccctcgccggcgcctcgggcctgcggacgtgc
acccagcgcatctcggcgacggcgccgaacgggacgccctgtgtcctcgccgagctcggg
cgctgcggggctccgtgcgccgggaagcagacggtcgaggcgtaccggccgagcgtgctg
gcggtgtccgggctcatcgccgggacggacggccgtccgctgcgggccgccgccgatcag
ctggcgcggttgtccgcggcggagcactacgaacaggccgctcagcatcgcgatcagctg
gccggcctgatccgcgcggtcggccgggcgcatcggcagtcggcgctggcgggtatcccg
gagctgatcgccgccgggccggacggcaacggcggctgggaactggcggtgatccggcac
ggcaggctcgcgtcggcgggggtcgcccggcgcggcgtgccgccgatgcccgtcgtcgag
atgctcgtggcgtccgcggagacggtgatcccggggcccggcccgctcttcggcgcgatc
ccggaggagatcggcatcctgctgcgctggctgacccgccctggcgtccggctcgtgcgc
acgacgcatccctgggcggagcccgccgccgcgggcggctggcaggaatggctcgacctg
gcggcgagcgcgacggcgctggaacgagtggcgggctag
DBGET
integrated database retrieval system
