Amycolatopsis roodepoortensis: NQK81_40995
Help
Entry
NQK81_40995 CDS
T08507
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03030
DNA replication
aroo03410
Base excision repair
aroo03420
Nucleotide excision repair
aroo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQK81_40995 (polA)
03410 Base excision repair
NQK81_40995 (polA)
03420 Nucleotide excision repair
NQK81_40995 (polA)
03440 Homologous recombination
NQK81_40995 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroo03032
]
NQK81_40995 (polA)
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_40995 (polA)
Enzymes [BR:
aroo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQK81_40995 (polA)
DNA replication proteins [BR:
aroo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NQK81_40995 (polA)
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NQK81_40995 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQK81_40995 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UUV31067
LinkDB
All DBs
Position
8515995..8518736
Genome browser
AA seq
913 aa
AA seq
DB search
MSPSENTTVANATPATAQAERPKLLLIDGHSMAYRAFFALPAENFKTKTGQTTNAVFGFT
SMLINLLRDEAPTHLAVAFDLSRKTFRSETYAEYKANRSTTPDEFKGQVGLVEDVLKVLG
IPALTKENYEADDIIATLTTQATAEGFDVLICTGDRDALQLVTDQVTVLYPKRGVSEMTR
FTPEAVEEKYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIRQFGSFNELVDRVD
EVKGKVGDALREHLGAVMLNRQLTELIRDVELELGPTMLELRPWDREAVHALFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGSKLAPGALTEWLSAHTGQDKPVGLAFRTTGASVRSD
LKAITFAAADGEGAYVDVTAMDAEDDKALTAWLADEKIQKIGHELKVPLHAVRARGWTFA
GLVMDTALAAYLVRPGQRTFELDDLVLRYLHRELRSEADTGDGQLSLLDGGAEDLEQKEI
QAELVKARAVAELAGALTKELEELGGAQLLAELELPLLQVITGLEASGIAVDIEHLTNLE
AHYLGRVTQAAEEAYAVIGKQVNLGSPKQLQVILFDELGMPKTKRTKTGYTTDAEALQSL
FEKTEHPFLQHLLEHRDATRLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSVDPNLQ
NIPIRTEEGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDEGLIQAFNSGEDLHTF
VASRAFSLPPEEITPELRFRVKAMSYGLAYGLSAYGLSQQLRISTEEAKEQMEAYFSRFG
GVRDYLHSVVGDAAKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADII
KVAMLNVHKALTEAKLKSRVLLQVHDELVLEVADGEREQLETLVRQGMGSAYELAVPLEV
SVGYGRSWNDAAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgagtgagaacacgaccgttgccaacgccacacccgccaccgcacaggccgag
cggcccaaactgctgctgatcgacggccattcgatggcgtatcgcgcgttcttcgcgctg
cccgcggagaacttcaagacgaagaccgggcagacgacgaacgcggtgttcgggttcacc
tcgatgctcatcaacctgctgcgcgacgaggcgccgacccacctcgcggtggcgttcgac
ctctcccgcaagacgttccggtcggagacgtacgcggagtacaaggccaaccgcagcacc
accccggacgagttcaagggccaggtcgggctggtcgaggacgtgctgaaggtcctcggc
atcccggcgctgaccaaggagaactacgaagccgacgacatcatcgccacgctcacgaca
caggcgaccgcggaaggtttcgacgtcctcatctgtacgggtgaccgtgacgcgctccag
ctggtgaccgaccaggtcaccgtgctgtacccgaagcgcggcgtgtcggagatgacccgg
ttcaccccggaggcggtcgaggagaagtacggcctcacgccggcgcagtacccggacttc
gccgcgctgcgtggcgacccctcggacaacctgcccagcatcccgggcgtcggtgagaag
acggccgcgaagtggatcaggcagttcggctccttcaacgagctggtcgaccgggtcgac
gaggtcaagggcaaggtcggcgacgcgctgcgcgagcacctcggcgcggtcatgctgaac
cgccagctcaccgagctgatccgcgacgtcgagctggagctcggcccgaccatgctcgag
ctgcgcccgtgggaccgcgaggccgtccacgcgctgttcgacgagctggagttccgcgtg
ctgagggaccggctcttcgccaccctgcagagcgccgagcccgaggccgaggagggtttc
gaggtcagcggttcgaagctcgcgccgggcgcgctcacggaatggctgtccgcgcacacc
ggccaggacaagccggtcggcctggcgttccgcaccaccggggcgtcggtccgctccgac
ctgaaggccatcacgttcgcggccgcggacggcgagggcgcgtatgtcgacgtcaccgcg
atggacgccgaggacgacaaggcgctcacggcctggctcgccgacgagaagatccagaag
atcggccacgagctcaaggtcccgctgcacgccgtccgggcgcgcggctggacgttcgcc
gggctcgtcatggacaccgcgctcgcggcgtacctggtccgcccggggcagcgcaccttc
gagctcgacgacctggtcctgcggtacctgcatcgtgagctgcggtccgaggccgacacc
ggggacgggcagctttcgctgctcgacggtggcgccgaggatctggagcagaaggagatc
caggccgagctggtcaaggcccgtgcggtcgccgagctcgcgggagcactgaccaaggag
ctcgaagagctgggcggcgcgcagctgctcgccgagctcgaactgccgctgctgcaggtg
atcaccggtctcgaagcgtcgggcatcgcggtcgacatcgagcatctgaccaacctggag
gcgcactacctcggccgggtgacgcaggccgccgaggaggcgtacgcggtcatcggcaag
caggtcaacctcggttcgccgaagcagctgcaggtcatcctgttcgacgagctcggcatg
ccgaagaccaaacgcacgaagaccggctacaccaccgacgccgaggcgctgcagagcctg
ttcgagaagaccgagcacccgttcctgcagcatctgctggagcaccgggacgcgaccagg
ctgcgcaccacggtcgagggcctgatcaagtcggtcgccgacgacggccgcatccacacc
acactgctgcagacgatcgccgccaccggacggctctcctcggtcgacccgaacctgcag
aacatcccgatccgcaccgaggaaggccgccgcatccgtgacgccttcgtcgtcggcgac
ggatacgccgagctgatgacggcggactacagccagatcgaaatgcggatcatggcgcac
ctctcgcaggacgaagggctgatccaggccttcaacagcggcgaggacctgcacactttc
gtggcgtcgcgcgcgttctcgctgccgccggaggagatcacgccggaactgcgtttccgg
gtgaaggcgatgtcgtacggcctggcgtacgggctttcggcgtacggcctttcgcagcag
ctgcggatctcgaccgaagaggccaaggaacagatggaggcgtacttctcccgtttcggc
ggcgtgcgcgattacctccattcggtcgtgggcgacgcggcgaaggtcggttacaccgag
acgatcttcggccgccgccgttatctgccggacctcaacagcgacaaccggcagcgccgc
gagatggccgagcggatggcgctcaacgcccctatccagggcagcgcggccgacatcatc
aaggtcgccatgctcaacgtgcacaaggcgctgaccgaggcgaagctgaagagccgcgtg
ctcctgcaggtccacgacgagctcgtcctcgaggtcgccgatggcgagcgcgagcagctg
gaaacgttggtgcgccagggaatgggctccgcctacgaactggcggtcccgctggaggtc
tcggtcggatacggccggtcgtggaacgacgccgcgcattag
DBGET
integrated database retrieval system
