Amycolatopsis roodepoortensis: NQK81_41335
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Entry
NQK81_41335 CDS
T08507
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQK81_41335 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_41335 (uvrA)
DNA repair and recombination proteins [BR:
aroo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQK81_41335 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQK81_41335 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
AAA_16
RsgA_GTPase
AAA_21
AAA_25
APS_kinase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ScfRs
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UUV31133
LinkDB
All DBs
Position
8592769..8595624
Genome browser
AA seq
951 aa
AA seq
DB search
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH
CPQCGEAISKQTPQQIVDQVLAMEEGTRFQVLAPVVRGRKGEYLDLFENLQQQGYARVVV
DGTVHPLTDPPKLKKQEKHQIAVIIDRLSVKTSSRQRLTDSVETALRLADGLIELEFVDL
PENDPHRVRGFSENLACPNGHPLAIEDLEPRSFSFNAPYGACPDCTGIGVRKEVDPELVV
PDDEMSLGEGAIAPWAGGQSADYFIRLLESLSETIGFRMDTPWRKLPAKVQKAVLHGVDE
QVHVRYKNRYGRQRSYYASFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL
KPEILAVTLEHKTQGDRSIAEVCALSIAEASKFLDELELGKREQVIAGAVLKEIQARLRF
LLDVGLNYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLVRLRDLGNTLIVVEHDEDTIRSSDWVVDIGPGAGEHGGHIVHSGPYKKILRNKESITG
AYLSGRTKIEVPAIRRPIDKKRQLTVVGAREHNLRGLDVSFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVNGLANVDKLVRVDQSPIGRTPRSNPATYTGVWDH
VRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGDR
YNRETLEVHYKGKTVSDVLNMPIEEAAEFFEPIKAIHRHLATLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDISKLIGVINGLVDKGNTVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGTVIAEGTPEHVASVEESYTGQFLKTVLA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcgcctcgttgttcgcggcgcccgcgagcacaacctccgcggtgtggatctc
gacctgccccgcgacagcctgatcgtgttcaccggtctgtccgggtccgggaagtcgagc
ctcgccttcgacaccatcttcgccgaagggcagcggcgctacgtcgagtcgctgtcggcg
tacgcgcgccagttcctcggccagatggacaagccggacgtcgacttcatcgagggcctt
tcgcccgcggtgtcgatcgaccagaagtccacctcacgcaacccgcgttcgaccgtcggc
accatcaccgaggtctacgactacctgcgcctgctctacgcccgcgccggaaaggcgcac
tgcccgcagtgcggcgaggcgatcagcaagcagaccccgcagcagatcgtcgaccaggtg
ctcgcgatggaggagggcacccgcttccaggtgctcgctccggtcgtgcgcggccgcaag
ggcgagtacctcgacctcttcgagaacctgcagcagcagggctacgcgcgtgtcgtggtc
gacgggacggtccatccgctcaccgacccgccgaagctgaagaagcaggaaaagcaccag
atcgccgtcatcatcgacaggctctcggtgaagaccagctcgcggcagcggctcaccgac
tccgtcgagacggcgctccggctggccgacggcctgatcgagctggagttcgtcgacctc
ccggagaacgacccgcatcgcgtacgcgggttctccgagaacctggcctgcccgaacggc
cacccgctcgcgatcgaagacctcgagccgcggtcgttctccttcaacgcgccctacggc
gcctgccccgactgcaccggtatcggcgtccgcaaggaggtcgacccggagctcgtggtc
cccgacgacgagatgtccctcggcgagggtgccatcgcgccgtgggcgggcggccagagc
gcggactacttcatccgcctgctcgagtcgctttcggagaccatcggcttccgcatggac
acgccgtggcgcaagctgccggcgaaggtgcagaaggccgtcctccacggcgtcgacgag
caggtccacgtccgctacaagaaccgctacggccgccagcgttcgtactacgcgagcttc
gagggtgtcatcccgttcctcgagcggcgccaggagcagaccgagtccgagtacatgcgt
gagcggtacgagggctacatgcgcgaggtgccgtgcccggcctgtcagggcacgcggctc
aagccggagatcctcgccgtcaccctggagcacaagacgcagggcgaccggtcgatcgcc
gaggtctgcgccctttcgatcgcggaggcgtcgaagttcctcgacgaactggagctcggc
aagcgcgagcaggtgatcgccggcgcggtgctcaaggagatccaggcgcggctgcgcttc
ctgctcgacgtcggcctcaactacctctccctcgaccgcgcctccgggacgctgtccggc
ggcgaggcgcagcgcatccggctcgccacgcagatcggctccggtctggtcggcgtgctg
tacgtgctggacgagccgtcgatcggcctgcaccagcgcgacaaccaccgcttgatcgag
acgctggtccgcctgcgggatctcggcaacacgctgatcgtcgtcgagcacgacgaggac
accatccgctccagcgactgggtggtcgacatcggccccggcgccggtgagcacggtggc
cacatcgtccacagtggaccgtacaagaagatcctgcggaacaaggaatcgatcaccggc
gcgtacctgtcgggccgcaccaagatcgaggttccggcgatccggcgcccgatcgacaag
aagcggcagctgaccgtcgtcggcgcgcgcgagcacaacctgcgcggtctcgacgtgtcg
ttcccgctcggctgcctcgtgtcggtcaccggtgtctcgggttccgggaagtccacgctg
gtcaacgacatcctcgcgaccgtgctggcgaacaagctcaacggcgcccgccaggtcccc
ggccgtcacacccgcgtgaacgggctggccaacgtcgacaagctggtccgtgtcgaccag
tcgccgatcggccgcaccccgcggtccaacccggcgacgtacaccggcgtgtgggaccac
gtgcgcaagctgttcgccgcgaccaccgaggcgaaggtgcggggctaccagcagggccgg
ttctcgttcaacgtcaagggcggccggtgcgaggcctgcgccggcgacggcacgatcaag
atcgagatgaacttcctgccggacgtctacgtcccgtgcgaggtctgcaagggcgaccgg
tacaaccgcgagacgctcgaggtgcactacaagggcaagaccgtctccgacgtgctgaac
atgccgatcgaggaggcggccgagttcttcgagccgatcaaggcgatccaccggcacctg
gcgaccctcgtcgacgtcggcctcggctacgtccggctcgggcagcccgcgccgacgctg
tcgggcggtgaggcgcagcgcgtcaagctcgccagcgaactgcagaagcggtccaccggc
aagacggtctacatcctcgacgagccgaccacgggtctgcacttcgaggacatcagcaag
ctgatcggtgtgatcaacgggctggtggacaagggcaacacggtgatcgtcatcgagcac
aacctcgacgtcatcaagacctcggactggatcatcgacatgggtcccgagggtggttcc
ggcggtggcaccgtgatcgcggagggcacgccggagcacgtcgcttcggtggaggagagt
tacaccgggcagttccttaagaccgttctcgcatag
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