Amycolatopsis roodepoortensis: NQK81_44185
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Entry
NQK81_44185 CDS
T08507
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo00020
Citrate cycle (TCA cycle)
aroo00640
Propanoate metabolism
aroo00660
C5-Branched dibasic acid metabolism
aroo00720
Other carbon fixation pathways
aroo01100
Metabolic pathways
aroo01110
Biosynthesis of secondary metabolites
aroo01120
Microbial metabolism in diverse environments
aroo01200
Carbon metabolism
Module
aroo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
aroo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NQK81_44185 (sucD)
00640 Propanoate metabolism
NQK81_44185 (sucD)
00660 C5-Branched dibasic acid metabolism
NQK81_44185 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NQK81_44185 (sucD)
Enzymes [BR:
aroo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
NQK81_44185 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UUV31660
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All DBs
Position
complement(9258514..9259386)
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AA seq
290 aa
AA seq
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MAIFLDEHSRIVVAGMTGAEGRKHTARMLAAGTKVVGGINPRKTGQEISLGGRALPVFGD
AAEAVGATGADVSVLFVPPPAVKDAVIEAVDAGIGLAVVITEGVPVHDAAAFWAHAKGSP
TRVIGPNCPGVISPGRSNAGIIPDGITKPGRIGLVSKSGTLTYQLMHELRDHGFSTCVGI
GGDPIIGTTHIDVVEEFEKDPETDVIVLVGEIGGDAEERAAEYVRARVSKPVVGYIAGFT
APAGKTMGHAGAIVSGSSGTAEAKKKALEAAGIPVGRTPSETAALVREVL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttcctcgacgaacacagcaggatcgtcgtcgccggcatgaccggcgccgaa
ggccgcaaacacaccgcgcgcatgctggccgcgggaacgaaagtcgtcggcgggatcaac
ccgcgcaagaccgggcaggagatctccctcggtgggcgcgccctgccggtgttcggagat
gccgcggaagccgtcggcgcgaccggcgcggacgtgtcggtgctgttcgtgccgccgccc
gcggtgaaggacgccgtcatcgaggccgtggacgccggaatcgggctggcggtggtcatc
accgagggtgtcccggtgcacgacgcggccgctttctgggcccatgccaagggaagtccg
acccgcgtcatcgggccgaactgtcccggcgtgatcagccccggccggtccaacgccggg
atcatcccggacgggatcacgaaacccggccggatcgggctggtctccaaatccggcacc
ctgacctatcagctgatgcacgaactgcgcgaccacggcttttcgacctgtgtcggcatc
ggcggcgacccgatcatcggcaccacgcatatcgacgtcgtcgaggagttcgaaaaggac
cccgagaccgacgtgatcgtgctcgtcggcgagatcggcggcgacgcggaagaacgcgcg
gccgagtacgtccgggcgagggtgagcaaacccgtcgtcggctacatcgccgggttcacc
gcaccggcggggaagacgatggggcacgccggcgcgatcgtgtccggatcgagcggcacc
gccgaggcgaagaagaaagcactcgaagcggcgggcatcccggtcggccgcacccccagc
gagacggcggcgctcgtgcgggaagtgctgtga
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