Amycolatopsis roodepoortensis: NQK81_44365
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Entry
NQK81_44365 CDS
T08507
Name
(GenBank) HAMP domain-containing protein
Organism
aroo
Amycolatopsis roodepoortensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
DUF948
GAF_3
AAA_13
ATG14
OmpH
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
UUV31695
LinkDB
All DBs
Position
9298987..9303489
Genome browser
AA seq
1500 aa
AA seq
DB search
MPEPGSKRGSRETARVGGAIDDQGLQRLLEGLKAVRDGDFSTRLPQVDDVLMDEMALVFN
GMVDQLALFTSEVTRVAREVGTDGKLGGQAAVPSVSGTWKDLTDSVNAMAGNLTGQVRDI
AEVATAVAQGDLSQKITVDVKGEMLELKNTINTMVDQLSSFADEVTRVAREVGSEGRLGG
QAEVPGVAGTWRDLTTSVNFMAGNLTDQVRSIAEVTTAVAKGDLSQKITVDARGEILELK
NTINTMVDQLSSFADEVTRVAREVGTEGALGGQAQVPGVAGTWRDLTTSVNFMAGNLTAQ
VRSIAQVATAVAKGDLSQKITVDARGEILELKNTINTMVDQLSSFADEVTRVAREVGTEG
RLGGQADVKGVSGTWKGLTESVNVMADNLTDQVRSIAEVTTAVAKGDLSQKIRVDARGEI
LELKDTINTMVGQLSSFADEVTRVAREVGTEGRLGGQADVKGVSGTWKGLTESVNVMADN
LTDQVRSIAQVATAVARGDLSQKITVEAKGEVAALAQTINTMVDTLSAFADEVTRVAREV
GTEGILGGQARVPNVAGTWKDLTDNVNSMANNLTGQVRNIAQVTTAVAQGDLSRKIDVDA
RGEILELKTTINTMVDQLSAFAAEVTRVAREVGSEGRLGGQAEVEGVSGTWKRLTENVNE
LAGNLTRQVRAIAEVTSAVATGDLTRSISVEAQGEVAELKDNINAMVQSLRETTRANEEQ
DWLNTNLARISGLMQGHRDLRVVATLIMNELTPLVGAQHGTLFLTESGEHGTRLRLITSY
GHSEDPDTPADFAMGQSLIGQAAQTKKPIVVDRTPPGFVKISSSLGSAPPVTLIVLPIVF
EDQVLGVIELASFGEFTAVRKDFLEQLMETIGVNVNTIIANARTDSLLEESQRLAEELQA
RSEELQAQQAKLQVSNAELEEKAELLARQNRDIEVKNFEIEQARQEIEERAQQLALASKY
KSEFLANMSHELRTPLTSLLILAGVLSQNSTQNLTPKQVEFAKVIQSAGTDLLQLINDIL
DLSKVEAGKMDIHHEPFPLRQLLDYVGTTFRPLTAEKGLDFQVTVEPNVPELLFTDEQRL
RQVLRNLLSNAVKFTERGSVELRVKLVDTVVSPSGALPHEALVAFSVIDTGIGIAEENLE
SIFGAFQQADGTTSRKYGGTGLGLSISREVAYLLGGEIRADSVLGTGSTFTLYLPVARFA
TPASLDESIVDNAGAERRVLVVEGEQNSLLTLLARGVAADVADSHGSVQVRAVADPVEAF
EEVKRESYRCVVLDTSIPGTSALSFLKRLAEGPDPVEVPVLAHATRKLSAAQERLLHGHA
KVHPVELLPSLDMLRERIMLHISASELEGILPLMQQPEETVPSSDRPSGLPAGRPRLQGR
KVLLVDDDPRNVYAISGMLELHGLSVVHAPNGRKGIEELLADDGIDLILMDVMMPEMDGH
ATTAAIREMPKFAGLPIITVTAKAMEGDREKSLAAGASDYVTKPVNAEELLACMERWLAD
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaccgggaagcaagcgtggatcgagagagacggcccgggtcggcggggcgatc
gacgaccagggcctgcagcgcctgctggaggggctgaaagccgtccgcgacggtgacttc
agcacccggctgccccaggtggacgacgtcctgatggacgagatggcgctcgtcttcaac
gggatggtcgatcagctggcgctgttcacgtccgaggtcacgcgggtcgcgcgcgaggtg
gggaccgacgggaagctcggcggccaggcggcggtgccctcggtttcggggacctggaag
gacctcaccgattcggtgaacgcgatggcgggcaacctcaccggccaggtccgcgacatc
gccgaggtcgcgacggcggtggcacagggtgatctgtcccagaagatcaccgtcgacgtc
aagggcgagatgctcgagctgaagaacacgatcaacacgatggtggatcagttgtcgtcg
ttcgcggacgaggtcacgcgggtggcgcgtgaggtcggcagcgaagggcggctcggcggg
caggccgaagtccccggggtggcggggacctggcgggatctgacgacgtcggtgaatttc
atggcgggcaacctgaccgatcaggtgcggtcgatcgccgaggtcacgactgcggtggcg
aaaggcgatctgtcgcagaagatcaccgtggacgcccgcggcgagatcctggagttgaag
aacacgatcaacacgatggtggatcagttgtcgtcgttcgcggacgaggtcacgcgggtg
gcgcgtgaggtcggcaccgagggagcgctcggcgggcaggcccaggttcccggcgtcgcc
ggcacttggcgggatctgacgacgtcggtgaacttcatggcgggcaacctcaccgcgcag
gtccgctccatcgcccaggtggccacggcggtggcgaagggtgacctgtcgcagaagatc
accgtggacgcccgcggcgagatcctggagttgaagaacacgatcaacacgatggtggat
cagttgtcgtcgttcgcggacgaggtcacgcgggtcgcgcgggaggtcggtaccgagggg
cggctgggtggtcaggcggacgtcaagggtgtgtcggggacgtggaagggcctgaccgag
tcggtgaacgtcatggccgacaacctgaccgatcaggtgcggtcgatcgccgaggtcacc
acggcggtcgcgaaaggcgacctgtcgcagaagatccgcgtcgacgcccgcggcgagatc
ctggaactcaaggacaccatcaacacgatggtcggccagttgtcgtcgttcgccgacgag
gtcacgcgggtcgcccgcgaagtcggcacggaaggccggctgggtggtcaggcggacgtc
aagggtgtgtcggggacatggaagggcctgaccgagtcggtcaatgtcatggccgacaac
ctgaccgatcaggtgcggtccatcgcccaggtcgcgaccgcggtcgcgaggggcgatctg
tcgcagaagatcaccgtcgaggccaagggcgaggtcgccgccctcgcgcagacgatcaac
accatggtcgacacgctgtcggccttcgcggacgaggtcacgcgggtggcgcgcgaggtc
ggcaccgagggcatcctcggcgggcaggccagggtgccgaacgtcgccgggacctggaag
gacctcaccgacaacgtcaactcgatggcgaacaacctcaccggccaggtccgcaacatc
gcgcaggtgaccaccgcggtcgcgcagggcgacctgtcccgcaagatcgacgtcgacgcg
aggggcgagatcctggaactcaagaccaccatcaacacgatggtcgaccagctttcggcg
ttcgccgcggaggtcacccgcgtcgcgcgcgaggtcggcagtgagggacggctcggcggc
caggccgaggtcgaaggcgtttccggcacctggaaacggctgacggagaacgtcaacgag
ctggccgggaacctgacccgccaggtccgggcgatcgccgaggtcactagcgccgtggcc
accggcgacctcacccggtcgatctccgtcgaggcgcagggcgaggtcgcggagctgaag
gacaacatcaacgcgatggtccagtcgctgcgcgagacaacgcgggcgaacgaggaacag
gactggctcaacaccaacctggcgcggatctccgggctgatgcaggggcaccgggacctg
cgggtggtggccacgctcatcatgaacgaactgaccccgctcgtcggcgcccagcacggg
acgctgttcctcaccgaatccggtgaacacggcacccggctgcggctgataaccagctac
gggcacagcgaggatccggacacgcccgcggatttcgcgatggggcagtcgctgatcggc
caggccgcgcagaccaagaaaccgatcgtggtcgaccggacaccgccgggtttcgtgaag
atctcgtcgagcctcggctccgccccgccggtcaccttgatcgtgttgccgatcgtcttc
gaggatcaggtgctcggtgtcatcgagctggcgtcgttcggcgaattcaccgccgtccgc
aaggatttcctcgaacaactgatggagaccatcggggtcaacgtcaacacgatcatcgcc
aacgcgcggaccgactccctgctggaggagtcccagcggctcgccgaggaactgcaggcc
cgctccgaggagcttcaggcgcagcaggcgaagctccaggtgtccaacgcggagctggag
gagaaggccgaactcctcgcgcggcagaaccgcgacatcgaggtgaagaacttcgaaatc
gagcaggcacgtcaggagatcgaagaacgcgcgcagcagctcgcgctggcctcgaagtac
aagtcggagttcctggcgaacatgtcgcacgaactccgcaccccgttgaccagcctgctg
atcctcgccggggtcctctcgcagaactcgacccagaacctgacgcccaaacaggtcgaa
ttcgccaaggtgatccagtccgcgggcaccgacctgctgcagctgatcaacgacatcctc
gacctgtcgaaggtcgaggcgggcaagatggacatccatcacgagccgttcccgctgcgg
cagctgctcgactacgtcggcacgacgttccggccgctgaccgcggagaaggggctcgac
ttccaggtcaccgtcgaacccaacgtgccggaactgctcttcaccgacgaacagcggctc
cggcaggtcctgcggaacctgctgtcgaacgcggtcaagttcaccgaacgcggcagcgtc
gaactgcgggtcaaactggtcgacaccgtcgtttcgccgtcgggcgcgctcccgcacgaa
gcgctggtggcgttcagcgtcatcgacaccgggatcgggatcgccgaggagaacctcgaa
tcgatcttcggggccttccagcaggccgacggcacaaccagccgcaaatacggcggcacc
gggctcggcctgtcgatcagccgagaggtcgcgtacctgctcggcggggagatccgcgcg
gacagcgtgctggggacgggcagcacgttcaccctctacctgccggtggccaggttcgcc
acgcccgcgagcctcgacgagtccattgtggacaacgctggcgcggaacggcgggtgctg
gtcgtggagggcgagcagaacagcctgctgaccttgctcgcccgcggtgtcgcggccgac
gtcgcggacagccacggctcggtccaggtccgggcggtggccgatccggtggaagcgttc
gaggaagtgaagcgggagagctaccgctgcgtcgtcctcgacaccagcatccccgggacg
agcgcgttgagcttcctcaaacggctcgccgaggggccggaccccgtcgaggtcccggtg
ctggcgcacgcgacccgcaaactcagcgcggcgcaggagcgattgctgcacggacacgcg
aaagtgcatccggtcgagctgctgccgtcgctggacatgctgcgggaacgcatcatgctg
cacatctcggccagcgagctcgaaggcatccttccgttgatgcagcagcccgaggagacg
gtgccgtcgtcggaccggccgtccggcctgcccgccggacggccgcggctgcagggccgc
aaggtgctgctcgtcgatgacgatccccgcaacgtgtacgcgatctcggggatgctcgaa
ctgcacggactgtcggtcgtgcacgcgcccaacggccgcaaaggcatcgaggaactgctg
gccgacgacggcatcgacctgatcctcatggacgtgatgatgcccgagatggacggccac
gcgacgaccgccgcgatccgcgagatgccgaagttcgccggcctgccgatcatcacggtg
accgcgaaggcgatggagggggaccgggagaagagtctcgccgccggggcgagcgactac
gtcaccaaacccgtgaacgcggaggaactgctggcgtgcatggaacgctggctcgcggat
tga
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