Arcobacter roscoffensis: NJU99_00015
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Entry
NJU99_00015 CDS
T09051
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aros
Arcobacter roscoffensis
Brite
KEGG Orthology (KO) [BR:
aros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aros03032
]
NJU99_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
aros03400
]
NJU99_00015 (gyrB)
Enzymes [BR:
aros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NJU99_00015 (gyrB)
DNA replication proteins [BR:
aros03032
]
Prokaryotic type
DNA Topoisomerases
NJU99_00015 (gyrB)
DNA repair and recombination proteins [BR:
aros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NJU99_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UTJ06512
UniProt:
A0ABY5E2V0
LinkDB
All DBs
Position
2605..4923
Genome browser
AA seq
772 aa
AA seq
DB search
MSQEYGASNIKVLKGLEAVRKRPGMYIGDTNTNGLHHMVYEVVDNSIDEAMAGYCRNIKV
TMTKDNWIRVEDDGRGIPVSIHPTENISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSSELKMTIHREGKIHYQEFSKGIPKAPLEVIGDAPRKTGTTIEFLADDSIFEVCD
YHFDVLAKRFREVAYLNPFISITLENEKTKVKEVYHFEGGIKQFVTDLNKETPVCDAVSF
SDKADDIEIDIALMYNTTYTEKTISFVNNIRTIDGGTHEAGFKAGLTRSIVKYLNNNANA
REKDTKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPLCQKLTSECLDRYFEE
NPQQAKAVMDKALMAARGREAAKKARELTRKKDSMSVGTLPGKLAECQSKDPEVRELYLV
EGDSAGGSAKQGRDRVYQAILPLKGKILNVEKSRLDKILKSDEIRNMITAMGCGIGEDFN
EEKIRYHKVIIMTDADVDGSHIQTLLLTFFFRFLRPIVEKGYLYIAQPPLYRYKKGKNEI
YLKDDTALSNFLIENGVENFSFAGLGTNDMIDLFKTVSRYRDMLQQLEKRYSLVEVLKHL
IENPDLVKLEQMDLYEVVRGFLEDKGYNILTKNINSEMIQLFVQTNEGLEELIIDDELFA
SPYFSEATYIFSKLVERDISMFDGRDLIELLDEVEGLAKKGAYIQRYKGLGEMNPEQLWE
TTMTPEDRRLLRVKIDDAEAASDAFTLFMGDEVEPRRNYIEEHAKDVEHLDV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaatacggcgctagtaatattaaagttttaaaaggtttagaagcagttaga
aaaagaccaggaatgtatattggtgatacaaacactaatggtttacatcatatggtttat
gaagttgttgataactctattgatgaagctatggctggttactgtagaaatattaaagta
actatgactaaagataattggattagagttgaagatgatggtagaggtattcctgtatct
attcatccaacagaaaatatatctgctgctactgttgtacttacagtattacatgcaggt
ggtaagtttgacaaagatacatataaagtatcagggggattacacggagttggtgtatct
gttgtaaatgcattatcttctgaacttaaaatgacaattcatagagaaggaaagattcat
tatcaagaattctctaaaggtattccaaaagctcctttagaagtaattggtgatgctcct
agaaaaacaggaactacaattgagttcttagctgatgattctatttttgaagtatgtgat
taccattttgatgttcttgctaaaagattcagagaagttgcatatttaaatccatttatt
tctattactttagaaaatgaaaaaacaaaagttaaagaggtttaccattttgaaggtggt
attaaacaatttgtaacagatttaaataaagaaacacctgtatgtgatgcagtttctttt
tcagataaagctgatgatatagaaattgatattgcccttatgtacaatactacatatact
gaaaaaactatttcatttgtaaataatattagaacaattgatggtggtacacatgaagct
ggttttaaagctggacttacaagatcaattgttaaatatttaaacaataatgcaaatgca
agagaaaaagatacaaaaattacaggtgatgatgtaagagaaggtttaattgcaattgtt
tctgtaaaagttccagaacctcagtttgaaggacaaacaaaagggaaacttggatcttct
tatgtaaaacctctatgtcaaaagctaacaagtgagtgtttagatagatattttgaagaa
aaccctcaacaagcaaaagctgtaatggataaagctttaatggcagcgcgtggtagagaa
gctgctaaaaaagctagagagcttactagaaaaaaagactcaatgtcagttggaacactt
cctggaaaacttgctgaatgtcaatcaaaagatcctgaagttagagaattatacctggtg
gaaggggattctgcgggtggttcagctaaacaaggtagagatagagtttatcaagcaatt
ttaccacttaaaggtaagattttaaatgttgaaaaatcaagacttgataaaattttaaaa
tctgatgaaattagaaatatgattacagctatgggttgtggtattggtgaagactttaat
gaagaaaaaattagatatcacaaagtaattatcatgacggatgcggatgttgatggatct
cacattcaaacacttcttttaactttcttctttagatttttaagacctatagttgaaaaa
ggatatttatatatagctcagccgccattatacagatataaaaaaggtaaaaatgaaatt
tatctaaaagatgatacagccttatcaaacttcttaattgaaaatggagtagaaaacttc
tcttttgctggattaggaacaaatgatatgattgatttatttaaaacagtttctagatat
agagatatgttacaacaattagaaaaaagatactctttagttgaggtattaaaacactta
attgaaaatcctgatttagtaaaactagaacaaatggatttatatgaagttgttagaggc
ttcttggaagacaaaggttataatattcttacaaaaaatattaactctgagatgatacag
ctgtttgttcaaacaaacgaggggctagaagagcttattattgatgatgagctgtttgca
tcaccttacttctctgaggccacatacatcttctctaagctagttgagagagatatctca
atgtttgatggaagagatttaattgaattactagatgaagtagaaggcttagctaaaaaa
ggcgcatatatccaaagatataaaggtctaggtgagatgaaccctgaacagttatgggag
actactatgactcctgaagatagaagacttttaagagttaaaatcgatgatgcagaagct
gcttctgatgcctttacactatttatgggtgatgaggtagaaccaagaagaaactatatt
gaagaacacgcaaaagacgttgagcatttagacgtttaa
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