Arcobacter roscoffensis: NJU99_01790
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Entry
NJU99_01790 CDS
T09051
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aros
Arcobacter roscoffensis
Pathway
aros03420
Nucleotide excision repair
aros03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NJU99_01790
03430 Mismatch repair
NJU99_01790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aros03400
]
NJU99_01790
Enzymes [BR:
aros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NJU99_01790
DNA repair and recombination proteins [BR:
aros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NJU99_01790
MMR (mismatch excision repair)
Other MMR factors
NJU99_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
HTH_7
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UTJ06844
LinkDB
All DBs
Position
355759..357813
Genome browser
AA seq
684 aa
AA seq
DB search
MSENLLSLLNDSQKDAAQHIDGSLLILAGAGSGKTKTITTRLAYLISIGIDPSSILTLTF
TNKAAAEMRERAFSLIDPAMINTPPLLCTFHKFGLLFLKFHMSELDRKNNFIIIDTDDKK
RILKSIEKDITTSLLVSEISKYKNTLITPSEAKAGAELKLYQQIADVYEKYEAYLAKNNL
VDFDDLILLPYLILKNNDKLAEEISQKYQYIMVDEYQDTNELQYKLLKKLCTSHNNLCVV
GDDDQSIYGWRGATIKNILNFSKHFEDTKVVKLEENYRSTDTILDHANQLIEHNRDRLGK
KLVGTRQKGDSIRIYESHDENEETRKIIDDIKKLLDSGISAKDVAILFRVNALSRSLEEG
FNRAGLNYKLVGGMKFYERAEIKDLIAYFRVLTNSHDNFSLKRIVNKPKRGIGKTTIEKL
DAKSAELQKPIFEIIQSFDAEELSAVVGKKNSRTLKVFEASIMDLKEQLKESKMKFLDLF
EEAFDYRASYDTVPDGFDRQGNIDEFYGYIRDFFIQNPHLDLKDFLNEIALESENDGLYN
EAVSMMSIHASKGLEFKHLFIIGFEEGFFPITGDGSDIEEERRLGYVAITRAMDNLTLSF
AHSRFYKGKRASLTKSRFLSESGLIKGCLTIEKHSSFKKGDLVQHKIFGMGRVQKANKAG
KDYKLTINFGGQRRDILSSFVEKI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatctattatcattactaaacgattcgcaaaaagatgcagcacaacatatt
gatggttcactgttgattttagcaggagcaggatctggaaaaacaaaaacaatcacaaca
agactagcatacttaatttcaattggaatagatccaagttctattttaacgcttactttt
acaaataaagcagcagcagagatgagagaaagagcttttagtttaattgacccagcaatg
ataaatactccaccattattatgtacattccacaagtttggattacttttcttaaaattt
catatgagtgaacttgatagaaaaaacaactttattattatcgatactgatgataaaaaa
cgaatattaaaatcaatagaaaaagatataacaacatcacttttagttagtgaaatatca
aaatataagaatactttaatcacgcctagtgaagcaaaagcaggtgctgaattaaaactt
tatcaacaaatagctgatgtatatgaaaaatatgaagcttatttagcaaaaaacaatctt
gttgattttgatgatttaattttacttccttatttgattttaaaaaacaatgataaatta
gcagaagagattagtcaaaaatatcaatacattatggttgatgagtaccaagatacaaat
gaacttcaatataagttacttaaaaaactttgtacatcacacaataacctttgtgttgtt
ggtgatgatgatcaatctatttatggctggagaggtgctacaattaaaaatattcttaat
tttagtaagcattttgaagatacaaaagttgtaaaactagaagaaaactatagatcaaca
gatacaatattagatcatgccaaccagttgattgagcataatagagatagacttggtaaa
aaacttgtaggaactagacaaaaaggtgattcaataagaatttatgaatcacatgatgaa
aatgaagaaacaagaaaaatcattgatgatattaaaaaacttttagatagtggtattagt
gcaaaagatgtggcaatcttatttagagtaaatgccctatcaagatctcttgaagaaggt
ttcaatagagctgggcttaactataaactagttggtggtatgaagttctatgaaagagca
gaaattaaagatttaattgcttattttagagtacttacaaattcacatgataacttctca
ttaaaaagaattgtaaataaaccaaaaagaggtattggaaaaacaactatagaaaaactt
gatgccaaatcagcagaacttcaaaaacctatttttgaaattattcaaagttttgatgcc
gaagaattatcagcagttgttggaaagaaaaactcaagaactttgaaagtatttgaagct
tctattatggatttaaaagaacagctaaaagaatctaagatgaaatttttagatttattt
gaggaagcttttgattacagagcatcttatgatactgttccagatggttttgatagacaa
ggaaatattgatgagttttatggttatattagagatttctttattcaaaatccacattta
gatttaaaagactttttaaatgaaatcgctttagagagtgaaaatgatggtctttataat
gaagcagtttcaatgatgagtattcatgcttcaaaaggtttggagtttaaacatctattt
attattggttttgaagaaggtttcttcccaattacaggtgatggaagtgatatcgaagaa
gaaagaagattaggttatgtagctattacaagagcgatggataatcttactttatctttt
gctcattcaagattttataaaggtaagagagcatctttaacaaaatctagatttttaagt
gaatcaggacttattaaaggctgtttaactatagagaaacactcatcatttaaaaaaggt
gatttagttcaacataagatatttggtatgggaagagttcaaaaagctaataaagctggg
aaagattataaactaactattaattttggtggacaaagaagagatatcttatcttcattt
gtagaaaagatataa
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