Arcobacter roscoffensis: NJU99_07965
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Entry
NJU99_07965 CDS
T09051
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aros
Arcobacter roscoffensis
Pathway
aros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NJU99_07965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aros03019
]
NJU99_07965
03016 Transfer RNA biogenesis [BR:
aros03016
]
NJU99_07965
Enzymes [BR:
aros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NJU99_07965
Messenger RNA biogenesis [BR:
aros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NJU99_07965
Transfer RNA biogenesis [BR:
aros03016
]
Prokaryotic type
tRNA degradation factors
NJU99_07965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
DAO_C
Motif
Other DBs
NCBI-ProteinID:
UTJ05207
UniProt:
A0ABY5DZ49
LinkDB
All DBs
Position
complement(1712505..1714682)
Genome browser
AA seq
725 aa
AA seq
DB search
MSTVCEFELNEKEEIFEFDKVAKQANGSVLAKLGKAVVLATVVSEFDNPVEEDFTPLTVQ
YVEKTYASAKLPGGFIKREAKPSEFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
DVDLQMLALNAANAALYTSNLPIKKSVCGVRIGKIEGEYVVNPTSTQLEDSSLDLYVAGS
KDELLMIEMKSISSAQLVEVDIEAFTKVHNANEICEEELVEAIAVAQKALHEANKTYEDG
FESVCKPLKEVELVKFTIDEEVIEYVRDNYSSNIKEAIKKLAKSERATELKDVAKLISQD
ENCLAKEIEYKVVYEAVSIVKRELVRDMIVKEKVRADGRGLKDVRPISIDTNILPSAHSS
CLFTRGETQALVVGTIAGSKDGQMYEVLTEKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKKALESTIDKDYTETVRLVSEILESNGSSSMATVCGGSLALKAAGVPISDL
VAGVAMGMVVEGDEYSVLTDIMGLEDHDGDMDFKVAGTKDGITALQMDIKLGGIELSVLK
EALLQAKEGREHILAIMEEAAEQIVPSEALPLVEQFAIDPSKMMVVIGKAGATIKEIIEK
FSVAIDLDRNSGNVKVSGESKQNVLDACEHIKTISNNATSRKETKSINFEDLYKPEDILT
GKVERIVDFGAFVSLPKGGEGLLHISKISKQRVNNVSDVFSVGDNVEIKVLNVKKDRIEL
SAASL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtatgtgaatttgaactaaatgaaaaagaagagatttttgaatttgacaaa
gtagctaaacaggcaaatggatctgttttagcaaaattaggtaaggcagtagttttagct
acagtagtaagtgaatttgataacccagtggaagaggattttactcctttgactgtacaa
tatgttgaaaaaacatatgcatcagcaaagcttccaggtgggtttataaaaagagaagca
aaaccaagtgaatttgaaactttaacttcaagagttattgatagaagtttaagaccatta
ttccctaaaggttatgtttatcctacaactattactgttatggtattaagtgctgataaa
gatgttgatttacaaatgctagctcttaacgctgcaaatgctgctttatatacttctaat
cttcctattaaaaaatctgtatgtggtgtaagaattggtaaaatcgaaggtgaatatgtt
gttaatccaacatcaactcaattagaagattcatcattagatttatatgtagctggttca
aaagacgagttgcttatgattgaaatgaaatcaatttcaagtgctcaattagttgaagta
gatatagaagcatttacaaaagtacataatgctaatgaaatttgtgaagaagagttagta
gaagcaattgctgttgcacagaaagctttacatgaagcaaataaaacttatgaagatggt
tttgaaagtgtttgtaaaccactaaaagaagttgaattagttaaatttacaatagatgaa
gaagtaattgaatatgttagagataactactcttcaaatattaaagaagctattaaaaag
cttgcaaaaagtgaaagagctactgagttaaaagatgttgcaaaactaatttcccaagat
gaaaattgcctagcaaaagagattgaatacaaggtagtttatgaagcagtttcaattgta
aaaagagaactagtaagagatatgattgtaaaagaaaaagttagagctgatggaagagga
cttaaagatgtaagacctatttctattgatactaatattttaccatctgctcactcatct
tgtttatttacaagaggtgaaactcaagctttagttgttggaacaatagctggttctaaa
gatgggcaaatgtatgaagttttaactgaaaagtctacttcaatggaaaactttatggtt
cattataacttccctggtttctcagtaggtgaagcaaaaccaatgtttggtgtaggaaga
agagagctaggtcatggtaacctaggtaaaaaagcacttgaatctactattgataaagat
tatactgaaacagttagattagtttcagaaattttagaatcaaatggttcttcttcaatg
gcaactgtttgtggtggttcattggcacttaaagcagcaggtgttcctatatctgattta
gttgcaggtgttgcaatgggtatggttgttgaaggtgatgagtattcagttcttactgat
attatgggcttagaagatcatgatggagatatggactttaaagtagcaggtacaaaagat
ggtattactgcacttcaaatggatataaaacttggaggaattgaactttcagtattaaaa
gaagcattacttcaagcaaaagagggaagagaacatattctagcaatcatggaagaagca
gcagagcaaattgttccaagtgaagccttacctttagttgagcaatttgcaattgaccct
agtaaaatgatggtagttattggaaaagctggtgcaacaattaaagagattattgaaaaa
ttctctgttgctattgatttagatagaaattctggaaatgtaaaagtaagtggtgaatct
aaacagaatgttttagatgcttgtgaacatattaaaacaatttctaacaatgccacttca
agaaaagagactaaaagtataaactttgaagacttatataaaccagaagatattttaact
ggtaaagttgaaagaatcgttgactttggtgcctttgtatctttaccaaaaggtggagag
ggattattacatatttctaaaatctctaagcaaagagtaaataatgtttctgatgtattc
tcagttggagataatgtagaaatcaaagtgttaaacgttaaaaaagatagaatcgaacta
tcagctgcttctctttaa
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