Arcobacter roscoffensis: NJU99_14510
Help
Entry
NJU99_14510 CDS
T09051
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aros
Arcobacter roscoffensis
Pathway
aros03030
DNA replication
aros03430
Mismatch repair
aros03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NJU99_14510 (dnaE)
03430 Mismatch repair
NJU99_14510 (dnaE)
03440 Homologous recombination
NJU99_14510 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aros03032
]
NJU99_14510 (dnaE)
03400 DNA repair and recombination proteins [BR:
aros03400
]
NJU99_14510 (dnaE)
Enzymes [BR:
aros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NJU99_14510 (dnaE)
DNA replication proteins [BR:
aros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NJU99_14510 (dnaE)
DNA repair and recombination proteins [BR:
aros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NJU99_14510 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UTJ06446
LinkDB
All DBs
Position
3079961..3083530
Genome browser
AA seq
1189 aa
AA seq
DB search
MSDTPQFTHLHLHTEYSLLDGANKIKPLAKKVKDLGMTSVAMTDHGNMFGAIDFYNAMRK
EGIKPIIGMEAYIHNSEELGDKTNRQRYHLCLYAKNDTGYKNLMYLSSQAYMHGFYYYPR
INKKLLRENSEGLVCSAACLQGEINWHLNLQNERNVRNGAKGYERAKEVALEYKDIFGDD
FYLEIMRHGIGDQHFVDDQILRIAHETGIKVVATNDTHYLNPKDADAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIEATQEISDKCNLEIKLGNPTPPNFKFTR
NKLEEQNVEIPFPEEEYSLENDKALFIYECWKGLEKRLEIVPAEKHEEYRDRLQVEIDII
NNMKFPGYMLIVWDFVIVAKQMGIPVGPGRGSAAGSLVAYCLFITDIDPMPYGLLFERFL
NPERVSMPDIDMDFCQSRRGEIIDYVVQQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YAKADAMAKLIPDELGINLTDSYEKEPKIKELCDSDPLSKRVWEFALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGLDTLATQYNGKYVEDVDLIKFDFLGLKTLTVIEEANKLI
EKRHGKRVDFLTTDVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLAPSNFEDIIAVLA
LYRPGPMESGMLDDFIDRKHGRAKIDYFHDELEPALKPILETTYGVIVYQEQVMQIVQSI
GGFSLGGADLVRRAMGKKIKEEMDKLKTEFADGAQEKGYTRAYAEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKCYYPSEFMAALLTLEKDNTDKVVKYVDEVKRLGLDLFPPDIN
KSDLVFSAKKLDEEEEVVMFGMGAIKGAGDIAINSILKERKENGEFTSLSNFISRIDGSK
VNKRVIESLIKAGALDGFHYTRKAMLDQIEQIGEAVGNVAKAKKMAVGSLFGDSEELTSV
EIQLEELPEFDNKELLELEKASLGFYVSGHPLDDYREQLDQIKYTLSSEIDEIADGSQAL
FVGKIESITEKISKKGNKFGIASIMDLHGNIELMMFENRLKELEDNFGIDLRSPSDSEPI
AFKVRISKDENFTRMNILKIESLQDAKREKVKTKQVEKIEPPLTVAIPFDDKDDVMYRLF
DIIANNQGRREFKVLVKSKLADIELETGFKVTSNVENLIKQIEGAYVVA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacaccacaatttacacatttacatttacatacagaatattcactactagat
ggtgcaaataaaattaaacccctagctaaaaaagtaaaagatcttggtatgacctctgtt
gccatgactgaccatggtaacatgtttggagcaattgacttttacaatgccatgagaaaa
gaaggtattaaacctatcattggaatggaagcttatattcataactcagaagagttagga
gataagacaaatagacaaagataccacttatgtttatatgcaaaaaatgatacaggatat
aagaacctaatgtacctaagctcacaagcttacatgcacggtttttattactatccaaga
atcaataaaaagcttttaagagaaaatagcgaaggtctagtttgttctgctgcttgtcta
caaggtgaaataaactggcacctaaacttacaaaacgaaaggaatgtaagaaatggtgca
aaaggttatgaaagggcaaaagaagttgccttagagtacaaagatatttttggggatgat
ttctaccttgaaattatgagacatggaattggtgaccaacactttgttgatgaccagatt
ttaagaattgcacatgaaactggaataaaagtagttgctacaaatgatacacactactta
aatccaaaagatgctgatgcacatgaggcttttatgtgtattgcaatgaataaactttat
gatgatccaaatagattaagacactcagttcatgagttttatttaaaatccccagaacaa
attgcaaaactatatgcagatattccagaagctattgaagcaacacaagaaatatctgat
aagtgtaatttagagataaaactaggaaacccaactcctccaaactttaagtttacaaga
aataaactagaagaacaaaatgtagaaattccttttccagaggaagaatattcacttgaa
aatgataaagctttatttatttatgagtgttggaagggtttagaaaaaagacttgaaata
gttcctgctgaaaaacatgaagagtatagagatagacttcaagtagaaattgatattatc
aacaacatgaaattcccaggatatatgcttattgtatgggattttgttattgttgcaaaa
caaatgggaattccagtaggacctggtaggggttctgctgctggttcactggtagcatat
tgtttatttattacggatattgatcctatgccttatggtttactttttgagagattccta
aatccagagagggtatcaatgcccgatattgatatggatttctgtcaaagtagaaggggt
gagattattgactatgttgttcaacaatatggtcgtgccaatgttgctcaaattattacc
tttggtaaacttcttgcaaaaggggtaattagagatgttgcaagagtacttgatatgcct
tatgcaaaagctgatgcaatggcaaaacttattcctgatgaacttggtattaatcttact
gattcatatgaaaaagaaccaaaaatcaaagaactttgtgactcagatccactatcaaaa
agagtttgggagtttgctctagcattagaaggactaaatagaaatgcaggtactcacgca
gcaggtgtggttatctcaaatgagcctttatggaaaaaaacacctttatttaaaccttca
ggacttgatactttagccactcaatataatggtaagtatgtagaagatgttgacttaatt
aaatttgacttcttaggtcttaagacccttacagttattgaagaagcaaataaattaatt
gagaaaagacatggaaaaagagttgatttcttaactacagatgtaaatgataaaggtgtt
tatgatcttattcaaacaggtaatacaattgggttattccaaatagaatccgatggtatg
caagacttatgtaaaagactagctccttcaaacttcgaggatattattgccgttctagcc
ttatatagaccaggtccaatggagtcaggaatgcttgatgacttcatcgatagaaaacat
ggtcgagcaaagattgactactttcatgatgagttagaacctgcacttaaacccatattg
gaaacgacatacggagttattgtatatcaagagcaagttatgcagattgtacaaagtatt
ggtggcttctcacttggtggtgcggacttagttagacgggctatgggtaaaaaaattaaa
gaagaaatggacaaacttaaaacagagtttgccgatggtgctcaagaaaaaggttataca
agagcttatgcagaagaactgtttgaccttattgtaaagtttgctggatatggatttaat
aaatctcactcagcagcctatgcccttgtaactttctatacttcttatcttaaatgttat
tatccatctgagtttatggcagcactacttactcttgaaaaagataatacagacaaagtt
gtaaagtatgtggatgaagtaaaaagattaggacttgatttattcccacctgatattaat
aaatcagatttagttttctctgctaaaaagctagatgaggaagaagaagtagtaatgttt
ggtatgggagcaattaaaggtgctggagatattgccattaactcaattctaaaagaaaga
aaagaaaatggagagtttactagtctttccaattttatttcaagaattgatggaagcaaa
gtaaataaaagagtaattgaatcacttattaaagcaggtgctttagatggtttccactat
acaagaaaagccatgctagatcaaattgagcaaataggtgaagcagttggtaatgtagca
aaagctaagaaaatggctgttggctctttatttggagatagtgaagaattaacttctgtt
gaaatccaattagaagaactaccagagtttgacaataaagagcttcttgaacttgaaaaa
gcttctttaggtttttatgtatcaggtcacccacttgatgattatagagagcaattagat
caaatcaaatatactttatcatcagaaattgatgagattgctgatggttcacaagcttta
tttgtaggtaaaatagagagtattactgaaaagatttctaagaaaggaaataaatttggt
attgcttcaatcatggacttacatggaaatattgagcttatgatgtttgaaaatagacta
aaagagcttgaggataacttcggtattgatttaagaagtccaagtgactctgaaccaata
gcttttaaagtaagaatttcaaaagacgaaaactttacaagaatgaacatcttaaaaata
gaaagtcttcaagatgcaaaaagagaaaaagtaaaaacaaaacaagtagaaaaaatagaa
ccacctttaactgtagctattccctttgatgataaagatgatgtaatgtataggttattt
gatattattgcaaacaatcaaggaagaagagagtttaaggtacttgttaagtcaaaactt
gcagatattgaactagaaacaggttttaaagtaacttcaaatgtagaaaatttaatcaaa
caaatagaaggagcatatgtagtagcatga
DBGET
integrated database retrieval system
