Anguilla rostrata (American eel): 135235189
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Entry
135235189 CDS
T10705
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135235189
Spliceosome [BR:
arot03041
]
Common components
Common spliceosomal components
General mRNP proteins
135235189
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
RRM_7
RSRP
RRM_8
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
135235189
NCBI-ProteinID:
XP_064156528
LinkDB
All DBs
Position
11:complement(1738018..1753531)
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AA seq
538 aa
AA seq
DB search
MADDFDIEAMLEAPYKKDETKPSSTNGTEERSKKKKRSRSRSQSRDKRRSKSRDRKKSRE
GRRSRSRERKRSRSRERKRSQSRSRERSGRYRARRSPFSGPKFNGGARGKIGPPLAIKIS
RRRSRSRSPFKKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRD
VRMISDRNSRRSKGIAYIEFVEVNSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAMANN
LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFITFADA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSIPFGAMAAVTDLQARLTQPSEAAAISPALNLNLNVNT
PLNLPTQPLATHCFQLSNMFNPQSEDGPGWDVEIQDDVIEECNKHGGVVHIYVDKNSPQG
NVYVKCPTIPAAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMPARR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgattttgatattgaagcgatgctcgaggctccttacaagaaggatgagacc
aagccctctagtaccaatggcaccgaggaacgcagcaagaagaaaaagaggagccggagt
cgcagccaaagccgcgacaaacggaggagcaagagccgcgatcgcaagaagagccgggag
gggcggcgcagccggagccgcgagcgcaagcgcagccgcagccgcgagcgcaagcgcagc
cagtcccgcagccgcgagcgctccggccgctaccgcgcgcgcaggagccccttctctggg
cccaaatttaatggcggcgccagggggaagatcggtccgcctcttgccatcaaaatcagc
cgcagacgctcccgaagcagaagccccttcaagaaggacaagagcccagtgagggagccc
atcgacaacctgaccccggaggagcgggacgcccgcaccgtcttctgcatgcagctggcg
gcccgaatccggccgcgggacctggaggaattcttctctgccgtggggaaggtgcgtgat
gtgaggatgatttcggacaggaactcccggaggtcgaagggcatcgcctacatcgagttt
gtggaggtgaactctgtgcccctggccatcgggctgacggggcagaggctgctgggagtt
cccatcatcgtgcaggcctcgcaggcggagaagaaccgtgccgcggccatggcgaataac
ctgcagaagggcagcgcggggcccatgaggctgtacgtgggctccctgcacttcaatatc
accgaggacatgctgcggggcatctttgagccattcggcaggatcgagagcattcagctg
atgatggacagtgagacggctcggtccaaagggtacggctttatcacgtttgcggacgct
gagtgtgctaagaaggctctggagcagctgaacgggttcgagctggccgggcggcccatg
aaggtgggtcatgtgaccgagcgcacggacgcgtccaccgccagctccttcctggacagc
gacgagctggagaggaccggcatcgacctgggcaccaccggccggctgcagctcatggcc
cggctggccgaaggcactgggctgcagattcctccagcggcccagcaggccctgcagatg
agcggctccatcccgttcggcgccatggcggctgtaacagatttacaagcaaggctgacc
caaccctcagaagctgcagccatcagccctgccctcaacctgaacctgaatgtgaacacc
cccctgaacctgcccacacagccgctggccacccactgctttcagctgtccaacatgttc
aacccgcagtcggaagacggtcccggctgggatgtggaaattcaagatgacgtcattgaa
gagtgcaacaaacacggaggcgtggtgcacatctacgtggacaagaactcgccacagggt
aacgtgtacgtgaagtgtcccacaattcccgctgccatggccgcagtgaacgctctacac
ggccggtggtttgcaggtaaaatgatcacggccgcgtacgttcccctcccgacctatcac
aacctgttcccggactccgtcacagccactcagctgctgatgcctgctcgccgatga
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