Anguilla rostrata (American eel): 135235241
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Entry
135235241 CDS
T10705
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arot01009
]
135235241 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135235241 (hdac6)
04131 Membrane trafficking [BR:
arot04131
]
135235241 (hdac6)
03036 Chromosome and associated proteins [BR:
arot03036
]
135235241 (hdac6)
Enzymes [BR:
arot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
135235241 (hdac6)
Protein phosphatases and associated proteins [BR:
arot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135235241 (hdac6)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135235241 (hdac6)
Membrane trafficking [BR:
arot04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135235241 (hdac6)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
135235241 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
135235241
NCBI-ProteinID:
XP_064156605
LinkDB
All DBs
Position
11:complement(3483907..3510003)
Genome browser
AA seq
1130 aa
AA seq
DB search
MDSEPDPPGSRVLRGSHRSPRSPDSMSKKKTSKPTIKKATLQEARKKGRMDRSKGEEEMS
NQLKNLDLHSKPKAAGTGLVYSETFARYHCLWDSSHPECPERVTTIMETLEREGLLSRCV
RVEARAATEEELQLVHSKEYVERMKSTQRMAESELRLLSDTYDSIYLHPESFLCATLAAG
SVLQLVDKVIASELRNGFSVARPPGHHAQADKMNGYSMFNNLAIAARYAQRRHGLERVLI
VDWDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPESDSSVVGTGNGEGYNINVPW
NKIGMKDGDYISAFQQLLLPVAYEFQPQLVLVAAGFDSVVGDFKGEMDASPQCFSVLTHL
LQGLAQGRMVLALEGGYNLQLTADGVCACMRSLLGDPCPALENPGAPSESALKSISQTIA
SLYPFWTSLQVLEGGVLPGGDPVTVRDRPSEGLGKSSPAHITGLVYDQRMMEHHNIWDSH
HPELPQRISRIFSRHQDLGLVSRCHRIPARPATEKELALCHSLQHIARIKSTEGMKPRDL
YRLGEEYNSIYISPESYRSALLAAGACFNAAQAVLAGEVRNAVAIVRPPGHHAEQDAACG
FCFFNTAALTARYAQTLAPRPLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYDNGMF
FPSSEDADFDRVGRGKGRGFNVNIPWNGGKMGDSEYLAAFHMLVMPIARQFDPELVLVSA
GFDAARGDPLGGYQVTPEGYAHLTHLLMSLAAGKVLLILEGGYNLTSISESMSMCTSMLL
GDLPPSLPALPPPHPNAAVAINHVLRAHAPYWSSLRMQIPESLRLSLPSPRGKRTPGGKG
KKSPRKGTPARTPGGESLPVTPQPAVVTPPALPPAGQEDDSLQDITQGLLSLDLDQSASA
SLSHVGGASPASAPVGGASPASVPVGGARPKVKPAPHQSPAGAEKSPAQVFPEKREGVES
VPVSSLHKPTGAQPNPEPASSASVTGAQESAVLDEASGWSKKDQPVFELFCGGQNMDGGT
MFVVEPLPWCPHLEAVGPLPAGGIDVFLPCEDCGADAENWVCLCCYKVFCGRYVNQHMVT
HGLVSEHPLVLSFADLSVWCYSCEAYVHNQVLYDARNAAHQSKFGEDVPA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaaccggaccccccggggtcaagggtgctcagaggctcccaccgttctccc
agatcacctgactccatgtcaaaaaagaaaaccagcaagcccacaatcaagaaggccact
ctgcaggaggctcggaagaaagggaggatggatcgaagtaaaggagaggaggagatgtcc
aaccagctcaaaaacctggacctgcatagcaagcccaaagctgctgggacaggcctggtg
tattcagaaaccttcgcacgctaccattgcctctgggacagcagccatccagaatgtccg
gagagagtgaccaccataatggagactctggagagggaggggcttctctcccgctgtgta
cgggtggaggcccgggccgcgactgaagaggagctccagctggtgcactcgaaagagtat
gtcgagcggatgaagtccacgcagaggatggccgagagcgagctcaggctgctctctgac
acgtacgactccatttacctccatcctgagtcctttctctgtgccactctggccgctggg
tccgtcctgcagcttgtggacaaagtgattgcgtcagagctgagaaatggattctctgtt
gctagacctccaggtcaccacgcgcaggctgataagatgaacggctactccatgttcaat
aacctggccatcgccgctcgctacgcccagcgacgacacggcctggagcgagttctgatt
gtggactgggatgtgcatcacggccaggggatccagtacatattccaggaggatcccagc
gtgctgtacttctccgtgcacagatatgaagagggcttgttctggcctcatctgcctgag
tcggacagcagcgtcgtgggcacaggaaacggcgaaggctacaatatcaacgttccgtgg
aacaaaatcggaatgaaagatggagattatatttcagccttccagcagctcctcctccca
gtggcttatgagtttcagccccagctggtgcttgtggcagctggcttcgactctgtcgtc
ggggatttcaagggggagatggatgccagtcctcagtgcttctctgtgctgacacacctg
ctgcagggtctggctcagggcaggatggtgctggcgctggagggaggatataacctgcag
ttgactgcagatggggtgtgcgcctgtatgaggtcactgctaggagacccctgccccgcc
ctggagaatccaggggcccccagcgagagtgcactgaagtcgatatcgcagaccatcgct
tccctgtacccgttctggaccagcctgcaggtgctggagggtggggtgctcccggggggt
gacccagtgacagtgagggacaggcccagtgaaggtttggggaagagtagccccgcccat
atcacagggctggtgtatgaccagaggatgatggagcaccacaacatatgggacagtcat
cacccggagctcccgcagcggatttcgcggatcttcagccggcaccaggacctgggcctc
gtctccaggtgccaccgcatcccggcccgcccggcaacggagaaagagctggccctgtgc
cacagcctgcagcacatcgcgcggatcaagtcgacggagggcatgaagccgagggacctg
tacaggctgggggaggagtacaactccatctacatcagccccgagagctacaggagcgcc
ctgctagcagctggagcctgctttaacgcagcacaggctgtgctggctggagaggtgcgg
aacgccgtggcgatcgttcgcccccccgggcaccacgcggagcaggacgccgcctgcggg
ttctgcttcttcaacacggcggccctgaccgcgcgctacgcccaaaccctcgccccgcgc
cccctgcgcgtgctcatcctcgactgggacgtgcaccacggcaacggcacccagcacatc
tttgaggaggacgacagtgtgctgtatatctcactccatcgctacgacaacggcatgttc
ttcccgtcctctgaggatgccgacttcgaccgggtggggcggggcaaggggcggggcttc
aacgtcaacattccgtggaacggcgggaagatgggcgactccgagtacctggcagccttc
cacatgctggtcatgcccatcgccagacagtttgaccctgagctggtgttggtgtctgca
gggttcgacgcggcccgaggggacccgctgggggggtaccaggtgaccccggagggttac
gcccacctgacccacctgctgatgagtctggctgctgggaaggtcctgctgatcctggag
ggaggttataacctcacgtcgatttccgaatccatgtccatgtgcaccagcatgttgcta
ggagacctgcccccctcactgcccgccctgcccccccctcatccgaacgcagcggtcgcc
atcaatcacgtcctgcgggctcacgccccctactggagctccctgagaatgcagattccc
gagtctctgcgcctctccctgcccagccccaggggtaaacgcaccccagggggcaagggc
aagaagtcgccacgaaaggggacgccagcccgaacccctgggggcgaatcgctccctgtc
acgcctcagccagcagtggtgacgcctccagcactgccccctgctgggcaggaggatgac
tcgctgcaggacatcacacaaggcctgctctctctggacttggatcagtccgcttccgcc
agcctcagtcatgtgggtggagctagtcctgcctcagcgcctgtgggcggtgctagtcct
gcctcagtgcctgtgggtggagctaggccaaaggtcaagcccgcccctcaccagagtcca
gcaggagccgagaaatcacctgcccaggtgtttcctgaaaaacgagagggggtggagagc
gtgcccgtgagctcgcttcacaaaccgactggcgcacagccgaaccctgagccagcctcc
agcgccagtgtgactggggcacaggagagcgcggtgctggatgaggcgtccggttggtca
aagaaggaccagccagtctttgagctcttctgtggcggccagaacatggacggggggacg
atgtttgtggtggagccgttgccgtggtgccctcacctggaagcggttggccctctgcct
gcgggcgggatagacgtgttcctgccttgcgaggactgcggtgcggacgcagagaactgg
gtctgcctctgctgctacaaggtgttctgtgggcgctatgtaaatcagcacatggtgacc
cacggcttggtttcggaacatcctctggtcctcagcttcgccgacctgtccgtctggtgc
tactcctgcgaggcctatgtccacaaccaggtgctgtatgatgcccggaatgccgctcat
cagtccaagtttggagaggacgttcccgcctag
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