KEGG   Anguilla rostrata (American eel): 135235487
Entry
135235487         CDS       T10705                                 
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot00565  Ether lipid metabolism
arot01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:arot00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    135235487 (pafah1b1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arot03036]
    135235487 (pafah1b1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arot04147]
    135235487 (pafah1b1a)
Chromosome and associated proteins [BR:arot03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    135235487 (pafah1b1a)
Exosome [BR:arot04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135235487 (pafah1b1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 LisH Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 LisH_PAC1 Beta-prop_WDR35_TULP_N eIF2A Nucleoporin_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc LisH_2 ARMC9_LisH LisH_WDR26 SutA-RBD DUF2570
Other DBs
NCBI-GeneID: 135235487
NCBI-ProteinID: XP_064157004
LinkDB
Position
12:complement(6722678..6742969)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKESEMDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPITQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLLASSSNDQTVRVWAVASKECKAELREHEHVVECICWAPESAHPTILEATGSE
VKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVQVHPGGRLVLSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHRSAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccaaagacagagggacgagctgaaccgagcgatagcggactatctccgc
tccaatggctacgaagaggcttactccgtctttaagaaggagtccgagatggatatgaac
gaagagctggataagaaatatgccggacttttagagaagaaatggacctctgtcatcagg
ctacagaagaaggtgatggaattggaatccaagctgaatgaagcgaaagaggagatcact
ctgggcgggcccatcacgcagaagcgggaccccaaggagtggatcccgcgccccccagag
aagtacgctctgagcggccaccgcagccccgtcacccgggtcatcttccaccccgtcttc
agcgtcatggtgtctgcctccgaggatgccaccatcaaggtgtgggactatgagacgggg
gactttgagcgcacgctgaagggacacacggactctgtgcaggacatctcctttgaccag
accgggaagctgctggcctcctgctccgccgacatgaccatcaaactctgggacttccag
ggcttcgagtgcatcaggaccatgcatggacatgaccacaatgtgtcgtctgtagccatc
atgcccaacggagaccatatagtgtcggcctccagggacaaaaccattaagatgtgggag
gtagcaacggggtactgcgtgaagacgttcacggggcaccgggagtgggtgcgcatggtg
aggcccaatcaggatggctcgctgctggccagcagctccaacgaccagacggtgcgggtg
tgggcggtggcctccaaggagtgcaaggcggagctgcgggagcacgagcacgtggtggag
tgcatctgctgggcccccgagagcgcccaccccaccatcctggaggccacggggtcagag
gtgaagaagagtgggaagccgggccccttcctcctgtcaggatccagagacaaaaccatc
aagatgtgggatgtgagcacgggcatgtgccttatgactttggtcggccatgataactgg
gtgcggggtgtgcaggttcaccctggcggccgcttggtgctgagctgtgctgatgacaag
actttacgcatctgggactacaagaacaagcgctgcatgaagaccttgtgtgcccacgag
catttcgtcacctctctggatttccacaggtcagcgccgtacgtcgtcactggcagcgta
gatcagactgtaaaagtgtgggaatgccgctga

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