Anguilla rostrata (American eel): 135235666
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Entry
135235666 CDS
T10705
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04510
Focal adhesion
arot04512
ECM-receptor interaction
arot04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
arot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135235666 (col4a4)
Glycosaminoglycan binding proteins [BR:
arot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135235666 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135235666
NCBI-ProteinID:
XP_064157473
LinkDB
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Position
12:15583925..15628105
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AA seq
1667 aa
AA seq
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MKHFSCLVPLTEIYLWWMVMVYLSGNSVKAGELLEPCGGRDCSVCQCFPAKGSMGTPGRP
GSQGPRGPTGFPGPQGAPGEKGQHGDNGFPGTSGMKGDMGRMGLPGFAGIDGLPGHPGPG
GHPGLPGLDGCNGSRGEPGFPGLPGRDGPPGISGIPGQKGSKGEPVHYFNMLPGLPGDPG
PAGRAGQPGPPGTAGPMGPMGRIGFNGIEGPPGVPGPRGEPGDMGRPLKGDKGEEGDLGP
KGEPGPFETVQPPEDHHKRGEKGLKGYKGLCGVSGRDGRDTPPGPKGEKGIVGFPGERGP
PGYSGSPGLPGERGSGGTFGLPGLIGNPGPKGIRGDPGEKGRQMFQQNDCTGNSGDPGPP
GPMGAQGSRGEMGMHGVPGSPGVTIVGPKGQPGAPGPTGPKGMKGDPGRFYVNGPTPGEP
GKQGPKGPKGAIGQPGNPGYYCVPGLTGDPGEDGDKGPPGPSGYNGIKGDNGDCECGGPM
NLIGNTGPMGPRGPPGYRGPPGSTGRKGNVGELGDPGERGPQGFSGFPGHRGEKGQKGDL
FIVDIKGPKGDQGPPGPPGPLGFFGRPGEEGKHGEIGSRGPEGDSSPGFPGDRGYTGNPG
EKGPPGLVGPPGIGIMGPVGKRGPQGEEGPLGLTGPPGPKGVQGDSQPCMPSDPGPSGPK
GLPGTPGNRGAPGSEGYRGYPGLDGPKGERGQPGPCCVSGPKGMPGWVGDVGDPGSEGLS
YDGFPGERGEPGPPGFQGPTGDSLNGASGPMGPKGIHGFSGPKGVPGPPGPTGEAGAQGS
PGLPGRKGPQGDIGEEGEPGPQGPTPPCNMGGPGTPGSNGLEGDRGPTGYQGDKGDLGDT
GPPGYGRKGRPGQPGRPGQPGCPGQQGPAGPTGDPGLQGTPGQKGFRGVPGGDGPPGGPG
QIGPPGSLGQKGERGFQGRDGLCGDDGPKGEKGPRGDPGPPAPPRISRIKGCTGGPGSRG
PQGFTGRRGDKGWPGDIGDPGYPGWDGPPGFEVGPRGPPGKSGRNGGPGPPGPTGPRGLA
GFPGDAGDQGDPGPSGFPGNPGPPGANGIKGDRGDSLGAPGPPGDRGPPGDNGQCAPSGE
PGDDGDPGMPGAPGCRGHPGPKGHTGPPGPPGACGPPGPCGETGAEGPMGQPGYPGPSGN
PGYPGIRGPPGPPGLHGLDGLKGVKGEKGVRGPGIPGPPGSRGYLGEKGPCGSPGLPGPS
QPGPKGSQGQLGCSGAPGPRGSTGPPGNDCVDARRGPYGEIGFPGPDGPPGPMGEIGAPG
PSVPIPGDQGDPGGQGCKGAKGIAGPIGSPGPPGIPGLSGPKGERGSPGLIGYPGPPGLP
GTPGAPGCKGQKGFTGPPGPMGPKGEVVPPPPPPHPLGNPGPPGPPGPLGIPGKPGPPGR
EGHRGLKGLVGWLGFPGLEGLPGPPGPVGDAGLPGELGRPGQQGPPGLMGDRGYPGPTGR
SRAAFLLVMHSQSDAIPQCPADMITLWSGYSLLYLEGQERAHTQDLGHAGSCLKVFGTMP
FASCSMASCDYASRNDKSYWLSTTAPAPATPVSGPQIQRHVSRCVVCEAPSPAVAVHSQD
TSVPACPNNWRSLWMGYSFLMHTGSGDEGGGQSLTSSGSCLKDFRRQPFIECQGPRGTCH
YFASAYSFWLTHVGMAEQFSPAPPMSTLKEEWEQRQRTSRCNVCMRE
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacttttcctgcttggtccccttgactgaaatttatctctggtggatggtgatg
gtgtatctttctgggaacagtgtgaaagcgggagaactgctggagccctgtggtggaaga
gactgctctgtgtgtcagtgtttcccagccaagggatcaatgggaaccccaggaagaccg
ggatcacaggggccccggggccccactggtttccccggccctcagggggccccgggagaa
aagggacagcacggggacaatggcttccccgggacatcaggaatgaaaggggacatgggt
aggatgggtttgcctgggtttgctgggatcgacggtttgccgggtcatcctgggccaggg
gggcacccaggacttcctggtctagacggctgtaacgggtcgaggggagagcccggtttc
cctggactgcctggacgggatggacctcctgggatatctggcattccagggcagaagggg
tccaagggagagcctgtccattatttcaacatgctccctggtcttcctggtgaccctggg
ccagcagggcgtgccgggcaacctggaccacccggcaccgctggccccatgggccccatg
ggacgcatcggtttcaatggaatcgaaggcccgcctggtgttcctggaccgagaggtgaa
cctggagacatgggcaggccacttaaaggagacaaaggagaggaaggagacctagggccc
aaaggcgagccaggaccctttgagactgttcagccaccagaggatcatcacaaacgagga
gaaaaggggctgaaaggttataagggactgtgtggtgtcagcggcagagatggaagagac
acccccccaggaccgaaaggagaaaagggcattgtgggatttcctggagagcggggcccg
cctggatatagtgggtctcctggactacctggagaaaggggttcaggtgggacttttgga
cttccaggtctgatcggcaacccagggcccaagggcatcagaggagaccccggggagaaa
ggacgccaaatgttccagcaaaatgattgcacagggaacagcggtgaccctggcccccct
gggccaatgggtgcccaagggagcaggggggagatggggatgcatggggtgcctgggtct
cctggtgtgacaattgtggggcccaagggccagccaggagctccaggccccactggaccc
aaagggatgaaaggagaccctgggaggttctatgtgaatgggccaacacccggagagcct
gggaaacaggggcccaaagggccaaaaggggccataggccaacctggaaatccagggtat
tactgtgtgcctggcctgacgggagaccctggtgaagatggagataaaggtccacctgga
ccttccgggtacaatggcataaaaggtgacaacggagactgtgaatgtgggggtcccatg
aatttgattggaaacactgggcctatgggtccacggggcccaccaggttaccgaggcccc
cctggaagtacagggaggaagggcaatgtaggcgagctgggggaccctggagaaaggggg
ccacaaggcttctcgggatttccagggcatcgaggtgaaaagggtcagaaaggtgacctc
ttcatcgttgacattaaaggtccgaaaggtgaccaagggccccctggcccccctggccct
ttgggattttttggcagacctggggaggaagggaagcatggtgaaattgggagccgtggc
cctgagggtgatagttccccggggtttcctggtgacagagggtatacgggtaatcctggg
gaaaagggaccccctggtctagtgggcccccctggcattggtatcatgggccctgtgggc
aagcgaggaccgcaaggagaggagggccccctaggacttacaggaccccctggacccaaa
ggtgtccaaggtgactcacagccctgcatgcccagcgatcctggtccttctggcccgaag
ggtctgcccggtaccccagggaacagaggggcaccaggaagtgagggataccgcgggtat
cctgggctagacgggcccaagggggaaaggggacagcctgggccttgttgtgtgagcggt
ccaaaaggaatgcccggatgggtaggagatgtgggagacccaggctctgaagggctgagc
tatgatggctttccgggagagcggggcgagcctggtccaccagggttccagggcccgaca
ggagactctttaaacggtgcatccgggcctatggggcccaaaggaatacatggcttttct
ggtcccaaaggagttccggggcctccaggtccaactggagaagcaggtgcccaagggtcc
cccggcctgcctgggagaaaggggccacagggggacataggggaggagggtgagccaggc
ccccaaggcccaacacctccatgtaacatgggagggccaggaactccaggctctaatgga
ttagaaggtgatcgaggccctacaggttatcagggtgataaaggtgatctgggagacaca
gggccccccgggtatggtaggaaaggacgccctgggcaaccgggccgcccggggcagcct
gggtgccctggacagcagggccccgcaggacctacaggggaccctggactccagggcacg
cccggacagaagggctttcgtggagtccctggtggagacgggccgcctggtggccctgga
cagatagggccacctggaagtctgggacaaaaaggggagagagggttccaaggccgtgat
ggcctgtgtggggatgatggaccgaaaggagaaaagggccctagaggggatccgggccct
cctgcacccccgcgaatcagcaggattaagggctgcacaggcggccctggaagccgtggc
cctcagggcttcactggaagaagaggtgataagggctggcctggagatattggtgaccct
gggtatcccggttgggacggcccaccaggttttgaggtgggcccacgaggaccacctggg
aagagtgggcgtaatggtggccctggcccacctgggcccactggtcctaggggactcgct
ggtttccctggagacgccggtgaccagggtgatcctggacccagtggatttcctggtaat
ccaggcccccccggagccaatggcattaaaggagacagaggggactctttgggtgctccc
ggtccacctggcgacagaggaccgcctggtgataatggacaatgtgctccatcaggtgaa
ccaggtgatgatggtgacccaggaatgcctggtgccccagggtgcaggggccatcctggt
ccgaaaggacacacgggccctccagggcccccaggtgcttgcgggcctccagggccttgt
ggagaaacaggggctgaagggccaatgggccagcctggatatccggggcccagtggaaac
ccaggataccctggaatcagaggccctcctggaccccctgggttacacggtctagatggt
ctgaagggggtgaaaggggagaagggggtcagaggaccaggtatcccagggcccccagga
tccagaggctacctaggggaaaagggcccttgtggttccccgggccttcctgggccctcc
caaccaggcccaaagggttcccagggtcagctggggtgttctggtgcccctggaccacgt
ggatctactggtccaccaggcaatgactgtgtagatgccagacgagggccttatggagag
attggcttccctggaccagatggtccaccagggccaatgggtgaaatcggggcccctggt
ccatctgtaccgatcccgggagaccagggggaccctggtggacaaggatgcaaaggggcc
aaaggaatagcaggccctataggctccccaggacctcctgggattccaggactgtcaggc
cccaaaggtgagagaggatctcctgggttaatagggtatccaggaccccctggcctccct
ggcacacctggtgcccctgggtgcaagggacaaaaagggttcacaggaccaccgggcccc
atgggtcctaaaggcgaggttgtgcccccaccacctccacctcacccacttgggaatcca
gggccccctggcccgccggggcctttgggtattcctggcaaacctggccccccagggaga
gaagggcatagaggattaaagggattggtagggtggcttgggttcccgggattagagggg
cttccaggaccacctggacctgtaggagatgcaggcttgcctggagagctgggacgccct
ggccagcaaggtccccctggtctcatgggggatcgcggatatccaggcccaaccgggagg
tctcgcgccgccttccttttggtgatgcacagccagtcagacgccattccccagtgtccg
gcggacatgatcacgctgtggagtggctacagtctgctgtacctggagggacaggagaga
gcgcacacgcaagacctgggccacgccgggtcgtgtctgaaggtcttcggcaccatgccg
ttcgcttcctgcagcatggcgtcctgcgactacgccagcaggaacgacaagtcgtactgg
ctgtcgaccacggcgccggcgccggccacgcccgtgtcggggccgcagatccagcggcac
gtgagccgctgcgtggtgtgcgaggccccctcccccgccgtggccgtgcacagccaggat
accagcgtccccgcctgccccaacaactggaggagcctgtggatgggctactccttcctc
atgcacacggggtcaggtgacgagggcggcgggcagtcgctgacgtcttcggggagctgc
ctgaaggacttccgccggcagcccttcatcgagtgccagggcccgcgcggcacctgccac
tacttcgccagcgcctacagcttctggctgacgcacgtgggcatggccgagcagttcagc
cccgcccccccgatgagcacgctgaaggaggagtgggagcagcgccagcgcaccagccgc
tgcaacgtctgcatgagggagtga
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