Anguilla rostrata (American eel): 135235945
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Entry
135235945 CDS
T10705
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arot03021
]
135235945
03041 Spliceosome [BR:
arot03041
]
135235945
Transcription machinery [BR:
arot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135235945
Spliceosome [BR:
arot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
135235945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
AslA_C
Motif
Other DBs
NCBI-GeneID:
135235945
NCBI-ProteinID:
XP_064158093
LinkDB
All DBs
Position
12:complement(33262131..33296707)
Genome browser
AA seq
1098 aa
AA seq
DB search
MDAVNAFNQELFSLIDMKPPISRAKMMSITKSAIKAIKLYKHVVQIVEKFIKKCKPDLKV
PGLYVVDSIVRQSRHQFGVDKDVFGPRFTKNITGTFHNLYLCPNEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGASASGMPDVHCDITEAGSPATDVKVTSVAPPPGMANLVAPPPV
TANYVAQPTLTVNSVAPPPVMGNSVAAAIPQLQNPEALAAMAHLFQSSQGQQLQQILQNF
HQPGKPHSPALDNSAMAQLQASANAAAAAIAQHGFASAPPVEQKTTFDKKLLDRFDYDDE
PDAAEEAKKEEPSPAAAPPAYGIPEGTQLQMQQPVFPQGPAQMPNMEHYQSHTAGLPHGL
AHQVSLPPNGQLQTCGLVPPQPYPGMMPPMGQPVVPQQVGVGPPGFVGGYPPQNEAYAQH
MVQQSQGVSMEIDQPMLKEGRHRLDGRRSRSGSRSPRRRRSRSNSRSRRSRYRRSRSRSR
ERRRGGGSPRSQSQERGERERERERRQRGLPRMKTGTLSVCSTTLWVGQLDKRTQQQDVA
CLLEEFGQIESINMIPPRGCAYIVMVHRQDAFRALQKLSRGPYKVNQKTIKIAWALNKGI
KAEYKQYWDVELGVTYIPWNKVKPEDLESFREGGMLDGDTLCPEWKGLLGVDMERSGERA
QNGGLEPAHAEDAAAAAASSRAQMPSVQPVGVVGALHPPSYPPPMGLPPPSFPPGVPPPP
PPPFLRQGFNPMQMPPGFPPPGGMPPMGNTGPPAPTPGVNIPTSAVPGSSGEAPSKDSMG
GSYPPPPSGGGPRNTSAPVDRFPVPGPNQGVSGNLPAPMSQPMANNQMGPGGPVMSPQPP
TGGLLGARPGMIPLQRPPGAPPPHMHRFPPHPPRPNMPPMPPPMMPRGPPQMMHREPPPG
GFGMPPPHPMRGPFPPPGPPFMRGPEGPDDWEGRPPRGDRPGFGRDREPERFRGRQPYGR
GGGEGRDHYAGRHEDPEQQGGWERERDGGRDWKRSPEREEGGAAPHWGGGHRERPRERRP
RERVSRWDTDGPKERVGGEADAADAQHKPASGEAPSDSGKEPVGAEPPSQHSKVTVEPQP
SPPMASTEPTEKSQEAES
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgttaacgcttttaatcaggagcttttctccttgatagacatgaagcctccg
atttctcgagccaagatgatgtcgataaccaaatcggccataaaggcgattaagttatac
aaacacgttgtccagattgttgagaagttcatcaagaagtgtaagccagacttgaaagtc
ccgggactgtacgtggtagactccatcgtccggcagtcgcgacaccagttcggcgtggac
aaagacgtgttcgggcccaggttcacgaaaaacataacggggacctttcacaacctctac
ctgtgtcccaatgaagacaagagtaagatcgtgcgggtgctgaacctgtggcagaagaac
ggcgtgtttaagatcgagatcatccagccgctgctggacatggccgctggtgccagcgct
tcggggatgcccgatgtacactgtgacatcacagaagcagggtcgcccgccacggacgtg
aaggtgacctcggtagccccaccccccgggatggcaaacttggtggccccgccccccgtg
actgcaaactatgtggcccagcccactttgacagtgaactcggtggccccgccccccgtg
atggggaactccgtggcggccgccattccgcagctgcagaacccggaggccttagccgcc
atggctcacctcttccagtcctctcagggccagcagctgcagcagattctgcagaacttc
caccagcccgggaagccccattccccagcgctggacaacagtgcgatggcccagctgcag
gctagtgccaatgctgccgccgccgccatcgcccagcacggcttcgctagcgccccgccc
gtcgagcagaagaccacctttgacaagaagctgctcgaccgctttgactacgacgacgag
ccggacgcggccgaggaggcgaagaaagaggagccgtcccccgccgcggcccccccagct
tatgggattcctgaaggcacacagctgcagatgcagcagccggtgtttccccagggtccc
gcgcagatgccaaacatggagcactatcagtcccacacagccggcctgccccacggcctg
gctcaccaggtgtccctccctccgaacgggcagctccagacgtgcggcctggtccccccc
cagccatacccaggcatgatgccccccatggggcagcctgtcgtgccacagcaggtgggg
gtggggcccccggggttcgtgggggggtaccctccccagaacgaggcctacgcccagcac
atggtgcaacagtctcagggagtttccatggagatcgatcagcccatgctgaaggaaggc
aggcatcgattggacggcaggaggtcccggtcgggctccaggtccccgcggcgcaggagg
tcccggtccaactcgcggtcacggaggtcccggtaccggcggtcccgctcgcggtccagg
gagcggaggcgcggcggcggctccccccgctcgcagtcccaggagaggggcgagcgggag
agggagcgggagcggcggcagagggggctgccccgcatgaagaccggcacgctcagcgtg
tgcagcaccacgctgtgggtcggccagctggacaagaggacccagcagcaggacgtggcg
tgcctgctggaggagttcggacagatcgagtccattaacatgattccgccccggggctgt
gcctacatcgtcatggtgcaccggcaggacgccttccgcgccctgcagaagctcagccgc
gggccgtacaaggtcaaccagaagaccatcaagatcgcttgggccttgaacaaaggaatc
aaggcggaatacaagcagtactgggacgtggaactgggcgtgacctacatcccctggaac
aaggtgaaaccggaagacctggagagctttcgggagggagggatgctggacggtgacaca
ctctgtccagagtggaagggcctcctgggtgtggacatggagaggtccggggagcgcgct
cagaacggaggcctggagcccgcgcacgccgaagacgccgccgccgccgctgcctcgtcc
cgtgcgcagatgccgtctgtccagcccgtgggtgttgttggggcccttcaccccccctcg
tacccccctcccatgggcctgccgcctccgtccttccccccgggggtgcctccaccgccc
cctccacctttcctccggcagggattcaaccccatgcagatgcctccaggtttccccccc
ccaggcggaatgccccccatgggaaacacggggccccccgcccccacccccggcgtcaac
atccccacctcagccgtgcctggctcctcaggggaagctccctctaaggactccatgggt
gggagttatccgccccctccctcaggcgggggtcccaggaacaccagcgcgcccgtggac
agattccctgtcccgggaccgaaccagggggtcagcggcaacctccctgcccccatgtcc
cagccaatggccaataaccagatgggtccaggaggtccggtgatgagcccgcagcctcct
acgggaggtctgctgggggcccgtccgggcatgatccccctgcagcgccccccgggggca
cctccgccccacatgcaccgcttcccccctcacccgccccgccccaacatgccgcccatg
cccccgcccatgatgccccggggtccgccccaaatgatgcaccgagaaccaccccctggg
ggcttcggcatgcccccgccccaccccatgagaggacccttcccccctccgggacccccc
ttcatgaggggccccgaggggcccgacgactgggagggccggccgccccgaggcgatcgg
ccgggtttcgggcgggacagggagccggagcgcttcagggggcggcagccttacggccgg
gggggcggggaggggcgggaccactacgcgggtcggcacgaggatcccgagcagcagggg
gggtgggagcgggagcgggacggcggcagggactggaagcggagccccgaacgcgaggag
gggggggcggccccgcactggggcggggggcacagggagcggccgagggaacgcaggccc
cgcgagagggtgtcgcgctgggacacggacgggcccaaagagagggtggggggtgaggcg
gacgccgccgacgctcagcacaagcccgccagcggcgaggctccctcagactctggtaaa
gaacccgtgggggcggagcctccttcgcagcactccaaagtgactgttgagccacagccc
tctccaccaatggcgagcacagaacccacagagaagtcacaggaggcggagtcgtag
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